| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27900 |
|---|
| Symbol | |
|---|
| ID | 8396678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 3091592 |
|---|
| End bp | 3091852 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644987529 |
|---|
| Product | SSU ribosomal protein S18P |
|---|
| Protein accession | YP_003145132 |
|---|
| Protein GI | 257065460 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000408904 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT ACTCCAAGCA GCCTCGCCGT AAGTACTGTC AGTTCTGCAA GGACGACACC
GAGTACGTCG ACTACAAAGA CACGGCTCTG CTGCGCAAAT ACATGACCGA TCGTGGCAAA
ATCAAGCCCC GCCGCGTGAC TGGCGCTTGC GTCCAGCACC AGCGTGACGT CGCCAACGCC
ATCAAGAACG CTCGTGAGAT GGGCCTCATG CCCTACACGG TTCCTGCAGT GAGCGGCCGC
GGCGACCGTC GTAACCGCTA A
|
|---|
| Protein sequence | MAEYSKQPRR KYCQFCKDDT EYVDYKDTAL LRKYMTDRGK IKPRRVTGAC VQHQRDVANA
IKNAREMGLM PYTVPAVSGR GDRRNR
|
|---|
| |