Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27500 |
Symbol | |
ID | 8396638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3044053 |
End bp | 3045966 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644987492 |
Product | indolepyruvate ferredoxin oxidreductase, alpha/beta subunit |
Protein accession | YP_003145097 |
Protein GI | 257065425 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TCCTGATGGG AAACGAAGCC TTTGCCTGCG CGGCGCTCGA GGCCGGCGCA TCGGTGATCG CCGGCTACCC CGGCACGCCG TCCAGCGAGG TCATCGAGAC CGTGGCCAAG CGCGTGGCCG ACGGCTCGGC AACGGGCGTG CATGTGGAAT GGTCCACCAA CGAGAAGGCC GCTCTGGAGG TGCTGGCCGG CGCCGCCTAT TCCGGCGCGC GGACCCTGTT CACCTGCAAG CAGGTGGGTC TGAACGTGGC GTCCGACCCG CTCATGAGCC TGAACTACGT CGGCGTCGAA GGCGGCTGCG TGCTGTACGT GGCCGACGAC CCGGGTCCCA TTTCCAGCCA GACTGAGCAA GACACCAGGC GTTTCGCGTC CTTCGCCAAG GTGCCGGTCT TCGATCCTTG CAACATCGAA CAGGGTATGG ACATGATGGG CGAGGCTTTC GCGCTGTCCG AACGCTACCA GATGCCGGTC ATCTTCAGGT CTACCACCCG CGTGTGCCAT TCGTCCACCT TCGTCGAGGT GGAGCCGTCC ACCCAGGGCG TTCAGGCCAA GGGGTTCACC AAGGACGACA GCCGCTTCGT CATCTTCCCG CGCCGATCCT ACCGCGCGCA TCTCGACATT GACCAGCGCC TGCGCCGCAC CGCCGCCGAG TTCTCGGGCG TGGGACAAAA GGGGCAGCCC CCATTGTCCC AAACCGATGA GGAGCCGGTG GACCTGTCGC GGTTCAACCC CGTCGAGACG GTGGGCGAAG CGCCCCGCTT GGGCATCGTG TGCGGCGGTG TGTCGACGGC GTACGTGCGC GAGGCCCTGA GCATCCTGGC GCAGCGCGCC GAGCTGCCCG CCTATAGGCT CATGCAGGTG GGAACCCCGT ATCCCTTCCC GGAGCAGCGG GCCCACGAAT TCTGCGAGGG TTTGGACCGC ATCGTCGTGT TCGAAGAGCT GGACCACGTG CTGGAAGACG AGTTCGTCAA GCTGCAGGGC ATGCGTGCCA TGGCGGGTTT CCCGACGGTG CGCGTCGTGG GTCGCAATTC GGGGTTCGGC CAGGTGGCGG GCGAAAACAC CGTCGAAAGC AGCTATCAGC TGCTGGTTGA ATGCTTCGGT CTGGAAGCCG ACGTGCCCCC AACCCTTGCC GACGAGGGCG ACGCAGCCGA CTGCGAGCTG CCCGTCCGTC CGCCCGTGCT GTGCGCGGGG TGCCCCCATC GCGGCGCGTT CTACGCATGC AAGCAGGCCG TGCGCAAGAT GCGCGTCAAG GCCACCTTCT CGGGCGACAT CGGCTGCTAT ACGCTGGGCA ACGCCAAGCC CCTGGACGCG GTGGACACCT GCCTGTGCAT GGGTGCCGGC ATCACCATGG CCCAGGGTTT ATCCGTGGCG AACCCCGAGG TCAAGCAGCT TGCATTCGTG GGCGACTCCA CGTTTTTCGC CAGCGGCATG ACGGGTGTGG CCAATGCGGT CTACAACAAC CACGACATCA CGGTGTGCGT GCTGGACAAC CGCATCACGG CCATGACCGG CGGCCAGCCC CACCCGGGCA CGGGCAACAC GCTCATGGGC ACGGCCTCCG AGCCTCTGGT GATCGAGGAC GTGCTGCGGG CGCTGGGCGT GAAGTGCATC ACCTTCGCCA ACCCGCACCA TCTGGACGAA AGCATCGCCG CAGCTCGCGA GGCTATCGAG TTCGAAGGTC CCAGCGCAGT CATCTTCCGG GCGCCCTGCG TCAACCTGAT CAAGCCCGCA GCGCCGGCTG CCATTACGGA TGCCTGCATC GGCTGCAAGC GCTGCATCAC GCAGATCGGC TGCCCGGCCA TCGGCTTCGA CGGCGAAAAG GCCGTCGTCG ACAGGTCGTT GTGCAACGGC TGCGGCCTGT GCATGCAGGT CTGCCCGTTC GACGCGATTG TGAAGGAGGG CTAA
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Protein sequence | MKKLLMGNEA FACAALEAGA SVIAGYPGTP SSEVIETVAK RVADGSATGV HVEWSTNEKA ALEVLAGAAY SGARTLFTCK QVGLNVASDP LMSLNYVGVE GGCVLYVADD PGPISSQTEQ DTRRFASFAK VPVFDPCNIE QGMDMMGEAF ALSERYQMPV IFRSTTRVCH SSTFVEVEPS TQGVQAKGFT KDDSRFVIFP RRSYRAHLDI DQRLRRTAAE FSGVGQKGQP PLSQTDEEPV DLSRFNPVET VGEAPRLGIV CGGVSTAYVR EALSILAQRA ELPAYRLMQV GTPYPFPEQR AHEFCEGLDR IVVFEELDHV LEDEFVKLQG MRAMAGFPTV RVVGRNSGFG QVAGENTVES SYQLLVECFG LEADVPPTLA DEGDAADCEL PVRPPVLCAG CPHRGAFYAC KQAVRKMRVK ATFSGDIGCY TLGNAKPLDA VDTCLCMGAG ITMAQGLSVA NPEVKQLAFV GDSTFFASGM TGVANAVYNN HDITVCVLDN RITAMTGGQP HPGTGNTLMG TASEPLVIED VLRALGVKCI TFANPHHLDE SIAAAREAIE FEGPSAVIFR APCVNLIKPA APAAITDACI GCKRCITQIG CPAIGFDGEK AVVDRSLCNG CGLCMQVCPF DAIVKEG
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