| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27080 |
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| Symbol | |
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| ID | 8396596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2995215 |
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| End bp | 2996144 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644987450 |
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| Product | DMT(drug/metabolite transporter) superfamily permease |
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| Protein accession | YP_003145056 |
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| Protein GI | 257065384 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA ACAAAGAAAG GCATCTGCAC CTGCCCGTCT GGGTATACAA GGGCATGCTT
CTGCTTGCCG CCGCCGTCTG GGGCCTGGGC ACCGTCGTGC TGAAAGACAC GGTGGACGCG
CTGCCGCCGC TATGGCTCAT CGCCGTGCGC TTCGTGTTGG CGGGCATCAT CCTGGGTGCG
GTGTGCTACC CACGCATGCG CGACCACCTG GACCGCGACA CGCTTCTGGC CGGTGCCTTC
CTGGGCGTGT TTGTCGGCGT GAGCTACGGG CTTAACACCA TCGGCCTGCT GTACACCACC
GCTGCGAAAA GCACGGTGCT CACATCCGCT TACTGCGTCA TGGTGCCGTT CGTGGCCTGG
GCCGCCTCGA AGATCAAACC CAGCCTGTTC AACTTAGTGG CTGCCGCGCT CTGCCTGAGC
GGCGTCGGGT TCGTGTCGCT GCAGGGCAGT ACCGAAGGCC TGTTCACCAT CGGGCTCGGC
GAAAGCATCA CGCTGCTTGC CGCGGTGTTC TTCGCGCTGC AGATCGCCTA CATGGCCAAG
CTGGGAGACG GACGGGACGC CATGGTGCTT ACGGTCGTCC AGTTCCTGGT CGGAGGCGGG
CTATGCGCCG TCGGCGGCCT TCTGTTCGAA GGACCCCTGC CTCTGGAGGC CTTTTCCGAC
CCTGCCGTCG TGCGGAACCT GGCCTACCTG ATCGTCGTTG CTTCCTGCCT GGCGCTGTCG
CTGCAGAACG TCGGCCTGGC GCACGTATCC CCCGCCCCCG CGGCGCTGTT TTTGGCGTCC
GAGAGCCTGT TCGGCGTTAT ATTCAGCATT CTGTTTTTGG GCGAGGCCGT ATCTGCCAAC
GTGATCGTCG GCTTCGTGCT CATCACGAGC AGCATCGTCA TCAGCGAGAC GTTCCCCTAC
CTGCGTTCAC GTTCCGCCGA TAATCGCTAG
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| Protein sequence | MNANKERHLH LPVWVYKGML LLAAAVWGLG TVVLKDTVDA LPPLWLIAVR FVLAGIILGA
VCYPRMRDHL DRDTLLAGAF LGVFVGVSYG LNTIGLLYTT AAKSTVLTSA YCVMVPFVAW
AASKIKPSLF NLVAAALCLS GVGFVSLQGS TEGLFTIGLG ESITLLAAVF FALQIAYMAK
LGDGRDAMVL TVVQFLVGGG LCAVGGLLFE GPLPLEAFSD PAVVRNLAYL IVVASCLALS
LQNVGLAHVS PAPAALFLAS ESLFGVIFSI LFLGEAVSAN VIVGFVLITS SIVISETFPY
LRSRSADNR
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