Gene Shel_27040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27040 
Symbol 
ID8396592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2988407 
End bp2988820 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID644987446 
ProductFHA domain-containing protein 
Protein accessionYP_003145052 
Protein GI257065380 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGACG TCATCCTGCT CGGAGTGCGT TTGCTCTTCG TAGCGCTGCT CTACCTGTTC 
CTGTTCGCCA TCATGCGCAC AGGAGTCGGC CTGGTCAAAG GCCAGCGTAA AAAAGAAAAG
GCCTGGCGCC TCATCGTGGA GAAGGGGCCC AAGGAGCTGC GCGGCGTGAA AACGCCGGTC
CACGGCCCCA TCATCGTCGG CCGCGCCCCC GGCGCGGACA TCGTCATCGG CGCCAGCTAC
GTGTCGGGCC GCCACGCCCG GTTCTCCCTC ATGGGCCAGA ACCTGTTCGT GGAGGACCTG
GGCTCCCGCA ACGGCACGGC CGTCAACGGC CAGCGCATCG GCCAGCCCAC GGCACTGCAT
GACAACGACC TCGTCAACGT AGGCGACGTC GCCATCCGGG TGAGGTTCGA ATAA
 
Protein sequence
MIDVILLGVR LLFVALLYLF LFAIMRTGVG LVKGQRKKEK AWRLIVEKGP KELRGVKTPV 
HGPIIVGRAP GADIVIGASY VSGRHARFSL MGQNLFVEDL GSRNGTAVNG QRIGQPTALH
DNDLVNVGDV AIRVRFE