Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26960 |
Symbol | |
ID | 8396584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2976604 |
End bp | 2977449 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987438 |
Product | fumarase alpha subunit |
Protein accession | YP_003145044 |
Protein GI | 257065372 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAA TCAGCACCGC AACGATTACC GAGGAAGTTG CCCGCCTGTG CATCGAGGCC GCATGCGACC TGCCTGTGGA TGTCGAAAAG CTCATCCAGG AGGCAACCGA CAAAGAGGAA TCCGAGTTCG GCAAATACGC CATGGAAAAG GTGTGCAAGA ACGTCAAGAT AGCTCGCGAA ACCAACGTTC CCATGTGCCA GGACACGGGC ATGGTCATCG TTTTCGCCGA AATCGGCCAG GAAGTCCACA TCACGGGCGG CAGCTTCGAA GACGCTGTGA ACGCGGGCGT GGCCAAGGGC TACATCGACG GCTACCTGCG CAAGTCCACG GTCATCGACC CTGTCCTGAA CCGCAAGAAC GCCGGCGACA ACACCCCGGC CATCATCTAC GCCCGTCTCG TGCCCGGCGA TGAGCTTTCC ATCACCATCA TGCCCAAGGG CGCCGGTTCC GAAAACATGT CCCAGCTGAA GATGCTCAAG CCCGCGCAGG GTCTGGAAGG CATCAAGCAG TTCGTCATCG ACTCCGTCGT CAACGCCGGC GGCAACCCCT GCCCTCCGAC CATCGTCGGC GTGGGCATCG GCGGCAACGC CGACAAGGCC ATGCAGCTTT CCAAGGAAGC CCTCCGTCGC GAGGCTGGCG CTCCCAACCC GAACCCTGAG TACGCAAAGC TGGAGCAGGA GCTTCTCGAA GCCATCAACA AGTCCGGCGT CGGCCCCCAG GGCTTCGGCG GCAGGACCAC TGCACTCGCC GTGCATATCG AGACGTATCC CACCCACATC GCAACCATGC CGGTGGGCGT CACCCTCAAC TGCCATGCCG CGCGTCATAA GCACGTCGTT CTCTAG
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Protein sequence | MKEISTATIT EEVARLCIEA ACDLPVDVEK LIQEATDKEE SEFGKYAMEK VCKNVKIARE TNVPMCQDTG MVIVFAEIGQ EVHITGGSFE DAVNAGVAKG YIDGYLRKST VIDPVLNRKN AGDNTPAIIY ARLVPGDELS ITIMPKGAGS ENMSQLKMLK PAQGLEGIKQ FVIDSVVNAG GNPCPPTIVG VGIGGNADKA MQLSKEALRR EAGAPNPNPE YAKLEQELLE AINKSGVGPQ GFGGRTTALA VHIETYPTHI ATMPVGVTLN CHAARHKHVV L
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