Gene Shel_26780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26780 
Symbol 
ID8396566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2957548 
End bp2958360 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID644987420 
ProductIron-regulated ABC transporter ATPase subunit SufC 
Protein accessionYP_003145026 
Protein GI257065354 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC CACTGTTGAA CGTGACGGAG CTGTTCGCCT CCGTCGACGA CAAACCGATC 
CTGAAGAACG TCGACCTGTC CCTCAACGCC GGTGAAACCC ACGTGCTGAT GGGTCCCAAC
GGCGCCGGCA AATCCACGTT CGGCCACGTG GTCATGGGCA ATCCCGTCTA CACCGTCAAC
GGCGGTTCCA TCGTGTTCGA CGGACAGGAC ATCACCGAGC TGTCCCCTGA CAAGCGCTCC
CGCGCCGGCC TGTTCTTGAG CTTCCAGGCT CCGGTGGAAA TCCCCGGCGT GCCCCTGTCC
AGCTTCCTGC GCGCGTCCAT GGCCGGCCGC GCCGAGAAGG AACTCAAGGG CAAGCAGTTC
CGCAAGCATC TGCAGGAGCT CGCCGAAGAG CTGGACATGA ACCCCGACTA CCTCGACCGC
GAGCTGGGCG TCGGCTTCTC CGGCGGCGAG AAGAAGAAGG TCGAAATGCT TCAGCTGCTG
CTCCTGCAGC CCAAGCTGGC CATTCTGGAC GAAACCGACT CCGGCCTTGA CGTCGACGCG
CTGTCTGTCG TGTCCCGCGG CATGGAGGCA TACCGTCGCC GCTGCAACGG TACGCTGCTG
GTCATCACCC ACAACACCCG CATCCTGGAG CACCTCAACA TCGACCGCGT CCATGTCATG
ATGACGGGCC ACATGGTCGC CGAAGGCCCC GCCAGCCTGG TGGAATCCAT CGACGAGCAG
GGCTTCGACC AGTTCTCCGA CATCGAAGCC GAAGCGGCAG CGCACGATTG CGAGCTTCTC
GCTGCGCTCA AGGCCAACGC CGAAAACGCG TAA
 
Protein sequence
MSEPLLNVTE LFASVDDKPI LKNVDLSLNA GETHVLMGPN GAGKSTFGHV VMGNPVYTVN 
GGSIVFDGQD ITELSPDKRS RAGLFLSFQA PVEIPGVPLS SFLRASMAGR AEKELKGKQF
RKHLQELAEE LDMNPDYLDR ELGVGFSGGE KKKVEMLQLL LLQPKLAILD ETDSGLDVDA
LSVVSRGMEA YRRRCNGTLL VITHNTRILE HLNIDRVHVM MTGHMVAEGP ASLVESIDEQ
GFDQFSDIEA EAAAHDCELL AALKANAENA