Gene Shel_26580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26580 
Symbol 
ID8396546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2931719 
End bp2933119 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content61% 
IMG OID644987400 
Productargininosuccinate lyase 
Protein accessionYP_003145006 
Protein GI257065334 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000988334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTT GGTCCGGACG GTTTGAAGAG GGCGTCGGCA AGTTCACGCA GGAGTTCGGT 
GCGTCGCTGC CCATCGACAA GCATATGTAC GCCCAGGACA TCCAGGGCTC CATCGCCCAT
GCGAAGATGC TCGCCAAGCA GGACATCATC AGCCAGTTCG ATGCCGACCG CATCGAAGTC
GGCCTGATGG AGATCCGTCA TCAGATCGAC AAGGGTCTCT TCACCTGGGA CATCAATGAC
GAAGACATCC ACATGGCCGT AGAGAAAACC CTGATCGAGG ACATCGGTCA GTCTGGCGCG
CGCCTACACA CGGGCCGCTC CCGCAACGAC CAGGTGGCCA CGGACATCCG CCTGCATGCG
AAGTTCATGA TCAAGGAGCT CATGGAGCAG AACTGCCGCA TGCGCGAGAG CTTCTACAAC
AAGGCCGAAA AGCATTACGG CGTCATCATG CCGGGCTTCA CGCATCTGCA GCATGCCCAG
CCGGTGCTGT TCAGCCACCA TCTGCTGGCG TACTTCTGGA TGTTCACCCG CGACTACAAG
CGTCTGTACA GCGCCTATCA GGCCGCCGAC GCCAACCCGT TGGGAAGCGC CGCGCTGGCA
GGCACCACCT ACCCCATCGA CCGTCAGATG ACCACCGAAC TTCTGGGCTT CGACCACCCC
ACACCCAACT CGCTGGACGC CGTGTCCGAC CGCGACTACC TGCTTGACCT GGAGTATGCG
TGCAGCGTGG CCATGATGCA CCTGTCGCGC CTCTGCGAGG AGATCGTCAT GTGGTCCACC
ACCGAGTTCG CCTTCATCAC GCTGGCCGAC TCGTATTCCA CGGGCTCGTC GATCATGCCC
CAGAAGAAGA ACCCCGACTT CGCGGAGCTG ACCCGTGGCA AGATGGGCCG CGTGGTGGGC
GATCTGGTCG GCCTGCTGGT CACCATGAAG TCGCTGCCGT TGGCATACAA CAAGGACCTG
CAGGAGTGCA AGGAGGGCGC CGTCGACGCC GCCAAGACCC TGAACGACTG CATGATCATC
ATGGACGGCA TGATCGACAC CATGAAGGTG CATCCGAAGG CCATGCGCAA GGGCGCCGGC
AAGGGCTTTA CCGCGGCAAC CGACGTTGCC GACTACCTGG CCAAAAAGGG CATGCCCTTC
CGTCAGGCGC ATGAGGTCGT GGGCAATCTG GTCCTGTACT GCGAGAAGAA CCACAAGGGC
CTGGAAAATC TGACCCTTGA GGAGTTCAAG AAGGCATCGG CCCTGTTCGA GGAGGACATC
GTGTCCGCTT TGGACCTGGA GGCCATCGTC CGCGCCCGTA CCACCTACGG CGGAACGGGG
CATTCGGCCG TAAAGGTCCA GATGGGCGAA GCCGCCGAGG CGCTTGCTGC CGACAAGGAG
CTTCTCGACA CCCTGAAATA A
 
Protein sequence
MALWSGRFEE GVGKFTQEFG ASLPIDKHMY AQDIQGSIAH AKMLAKQDII SQFDADRIEV 
GLMEIRHQID KGLFTWDIND EDIHMAVEKT LIEDIGQSGA RLHTGRSRND QVATDIRLHA
KFMIKELMEQ NCRMRESFYN KAEKHYGVIM PGFTHLQHAQ PVLFSHHLLA YFWMFTRDYK
RLYSAYQAAD ANPLGSAALA GTTYPIDRQM TTELLGFDHP TPNSLDAVSD RDYLLDLEYA
CSVAMMHLSR LCEEIVMWST TEFAFITLAD SYSTGSSIMP QKKNPDFAEL TRGKMGRVVG
DLVGLLVTMK SLPLAYNKDL QECKEGAVDA AKTLNDCMII MDGMIDTMKV HPKAMRKGAG
KGFTAATDVA DYLAKKGMPF RQAHEVVGNL VLYCEKNHKG LENLTLEEFK KASALFEEDI
VSALDLEAIV RARTTYGGTG HSAVKVQMGE AAEALAADKE LLDTLK