Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26580 |
Symbol | |
ID | 8396546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2931719 |
End bp | 2933119 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987400 |
Product | argininosuccinate lyase |
Protein accession | YP_003145006 |
Protein GI | 257065334 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000988334 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTTT GGTCCGGACG GTTTGAAGAG GGCGTCGGCA AGTTCACGCA GGAGTTCGGT GCGTCGCTGC CCATCGACAA GCATATGTAC GCCCAGGACA TCCAGGGCTC CATCGCCCAT GCGAAGATGC TCGCCAAGCA GGACATCATC AGCCAGTTCG ATGCCGACCG CATCGAAGTC GGCCTGATGG AGATCCGTCA TCAGATCGAC AAGGGTCTCT TCACCTGGGA CATCAATGAC GAAGACATCC ACATGGCCGT AGAGAAAACC CTGATCGAGG ACATCGGTCA GTCTGGCGCG CGCCTACACA CGGGCCGCTC CCGCAACGAC CAGGTGGCCA CGGACATCCG CCTGCATGCG AAGTTCATGA TCAAGGAGCT CATGGAGCAG AACTGCCGCA TGCGCGAGAG CTTCTACAAC AAGGCCGAAA AGCATTACGG CGTCATCATG CCGGGCTTCA CGCATCTGCA GCATGCCCAG CCGGTGCTGT TCAGCCACCA TCTGCTGGCG TACTTCTGGA TGTTCACCCG CGACTACAAG CGTCTGTACA GCGCCTATCA GGCCGCCGAC GCCAACCCGT TGGGAAGCGC CGCGCTGGCA GGCACCACCT ACCCCATCGA CCGTCAGATG ACCACCGAAC TTCTGGGCTT CGACCACCCC ACACCCAACT CGCTGGACGC CGTGTCCGAC CGCGACTACC TGCTTGACCT GGAGTATGCG TGCAGCGTGG CCATGATGCA CCTGTCGCGC CTCTGCGAGG AGATCGTCAT GTGGTCCACC ACCGAGTTCG CCTTCATCAC GCTGGCCGAC TCGTATTCCA CGGGCTCGTC GATCATGCCC CAGAAGAAGA ACCCCGACTT CGCGGAGCTG ACCCGTGGCA AGATGGGCCG CGTGGTGGGC GATCTGGTCG GCCTGCTGGT CACCATGAAG TCGCTGCCGT TGGCATACAA CAAGGACCTG CAGGAGTGCA AGGAGGGCGC CGTCGACGCC GCCAAGACCC TGAACGACTG CATGATCATC ATGGACGGCA TGATCGACAC CATGAAGGTG CATCCGAAGG CCATGCGCAA GGGCGCCGGC AAGGGCTTTA CCGCGGCAAC CGACGTTGCC GACTACCTGG CCAAAAAGGG CATGCCCTTC CGTCAGGCGC ATGAGGTCGT GGGCAATCTG GTCCTGTACT GCGAGAAGAA CCACAAGGGC CTGGAAAATC TGACCCTTGA GGAGTTCAAG AAGGCATCGG CCCTGTTCGA GGAGGACATC GTGTCCGCTT TGGACCTGGA GGCCATCGTC CGCGCCCGTA CCACCTACGG CGGAACGGGG CATTCGGCCG TAAAGGTCCA GATGGGCGAA GCCGCCGAGG CGCTTGCTGC CGACAAGGAG CTTCTCGACA CCCTGAAATA A
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Protein sequence | MALWSGRFEE GVGKFTQEFG ASLPIDKHMY AQDIQGSIAH AKMLAKQDII SQFDADRIEV GLMEIRHQID KGLFTWDIND EDIHMAVEKT LIEDIGQSGA RLHTGRSRND QVATDIRLHA KFMIKELMEQ NCRMRESFYN KAEKHYGVIM PGFTHLQHAQ PVLFSHHLLA YFWMFTRDYK RLYSAYQAAD ANPLGSAALA GTTYPIDRQM TTELLGFDHP TPNSLDAVSD RDYLLDLEYA CSVAMMHLSR LCEEIVMWST TEFAFITLAD SYSTGSSIMP QKKNPDFAEL TRGKMGRVVG DLVGLLVTMK SLPLAYNKDL QECKEGAVDA AKTLNDCMII MDGMIDTMKV HPKAMRKGAG KGFTAATDVA DYLAKKGMPF RQAHEVVGNL VLYCEKNHKG LENLTLEEFK KASALFEEDI VSALDLEAIV RARTTYGGTG HSAVKVQMGE AAEALAADKE LLDTLK
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