Gene Shel_26390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26390 
Symbol 
ID8396527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2915786 
End bp2916310 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID644987381 
Productnitroreductase 
Protein accessionYP_003144990 
Protein GI257065318 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA CATTCGATGC CATGCTGACC CGCCGTTCTG TAAGGTCTTT CAAGAGCGAC 
CCGGTGCCTC AGGAGCTGGT GGACAAGGTA ATCGAGGCCG GCCTGTACGC CGCCAGCGGC
ATGAACAGCC AGTCCTCCAT CGTCATCCAG ATAAGCGATC CCGAAACCAT GGATGAGCTG
CGGCGCGTGA ACGCCGAAAT TCTCGGTGCC AAGCCGGGGT TCGACCCGTT CTACGGCGCT
CCCATGGCGC TTATCGTGCT GGCGAATGTT GACGTCTTTA CTTATGTATA TGATGGAACG
CTGACCATGG GCAACATGAT GCTTGCCGCC CATGATCTGG GGTTGGCGTC GTGTTGGGTC
CACCGTGCCA AGGAGGAGTT CGAATCGGAG TTCGGCCGCA AGCTGTTGGA GAAGCTCGGC
CTCGACGACG AGTGGGAAGG CATCGGCCAT CTGGCGCTGG GCTATGCCGA CGGACCGCTT
CCCGAAGCGA AGCCCCGCAG CGAGGGCAGG GCTTTCCGCA TTTAA
 
Protein sequence
MSETFDAMLT RRSVRSFKSD PVPQELVDKV IEAGLYAASG MNSQSSIVIQ ISDPETMDEL 
RRVNAEILGA KPGFDPFYGA PMALIVLANV DVFTYVYDGT LTMGNMMLAA HDLGLASCWV
HRAKEEFESE FGRKLLEKLG LDDEWEGIGH LALGYADGPL PEAKPRSEGR AFRI