Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26350 |
Symbol | |
ID | 8396523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2909047 |
End bp | 2911431 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987377 |
Product | hypothetical protein |
Protein accession | YP_003144986 |
Protein GI | 257065314 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00144555 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTGTC CGAAGTGCGG AAACCAATTG AACCAAGACG ATGCGTTCTG CGGAAGCTGC GGTGCCCCCG TGGCGGATCG AGCGGATGCC TTGCAGAAAG CGATGCCGCA ACCCGAGGCA CCTGCGGCGC AGCCGCCCAC CCAGGCCCCG AAAAAGCGGG TCGGTGCCGG TATGGTCGCC CTTGCGGCCG TGCTCCTGTG CGGGCTTGTG GCCATAGGCG CCACCATTGC GGTGCTCCAT GGGGACGATG CCGATGAGTC AACGGCCACG ACGTCCCAGA CTGCCGGCCA GACCTCTACG GCGACAGCGG CCGACGGCCA AGAGGTCGTC AGCATGGAAC GCCCCGTTCT TATCTCCTTC ACCCAGGAAA GCGACGCTGC GTCCGTGGTG CCGAGTGTTG AACCGTACGC CGTCGAAGAC GGCCTGACCA ACGTGGTCAA CGCCAACAGG TTCTACTTGA CGGACGAGGA GCAGGATCTG GTGGTCCAAA ACGGGTTCGC CGTGTCGGTG GGCCAGGCAG GATACGAATT CTTCGACTCC TACGAAATGA ACCGCTACAG CCAGACGCCG AATTTCGTAA CCGTCGATTC GATGATGCAT ACCTACCATC TGTATTTCAG CTACCTCATG AAGAACACCG AGCGCGATTA CCTGGCGCCC GCCTTAGGCG AGGTGAGCCG GGCCATGCTC GACGAAAGTC TGGAGCAGCT TGCGGCGGCC GAAGGCACCG GGTGGGAGGA CGCCGCCCTG CGCAATGTGG CGTTCTTCGC GGTGGGCGCG AGCCTGCTCG ATCCCTCGAC CGAGGTGCCG TCCCAGGTGG AGGATGTGGT TTCCGCCGAA CTGGCGCAGA TTGAAGACGC CGCCGGCATC GCCGAATCCC CGCTGATGGG CGCCGGCAAC ATGGAAGATT ACAGCCAATA CGTCGTACGG GGCTACTACG AGGGCGACGA GCAGCTGGAA AGCTACTTCA AGGCCATGAT GTGGTACGGC CGCATGAACT TCGCTCAGAA AAACGAGGAC CTGGATAGGA GCGCCTGTCT GATGGCGCTG GCGCTGCAGG AAAGCGGCGC TCTGGCGGAT TGGGAAGGCA TCTACACCGT GACCAGCTTT TTCGCAGGCG CCAGCGACGA CTGCGGCTTC TACGAGTACT ATCCCATCCT CGAGTCGGTT TACGGCAAAA CTCCCTCCAT TGACGATCTG GTCGAAAACG AGGATGCGTG GGCCGAGGTC CACACTCTGA CGGCGGACAT GCCTGCGCCC CAGATCAACT CCATCGCCAC AGGGCGCGAC GACGACGCCG ACTACGAGGA GGAGAACAAG GGTTACCGCT TTATGGGGCA GAGGTTCACG CTGGACTCGG CCATCTTCCA GAAGCTGGTC TACAACGAGG TGCTTGCGAA CGACGCCGGC GAGGACCGCA TGCTGCCCTG CGCTCTTGAT GTGCCGGCGG CCTTGGGGTC CGACGAAGCT CTCGAAATCC TCGAGGAGCA GGGCGAAACC GGTTACGAGA ACTACTCCGA GAACATGACC GCCCTGCGTG AGGGCCTGGG CAGCGCCGAC GACGACACGC TGTGGTCGGC CAGCCTGTAC AGCCAGTGGC TCTATACGCT GGATCCGCTG CTGGACGTGA AGGGCGAAGG CTATCCGTCC TTTATGGCCA ACGACCAGTG GACCCGCAAG AACCTGCAGT CCTACCTGGG AAGCTACTCC GAGCTCAAGC ACGACACCAT TCTGTATTCC AAACAGGTCA TGGCCGAGAT GGGCGGCGGC GAAGAGCCCG ATGTGGACGA CCGCGGCTAC GTGGAGCCGG AGCCGATGGT GTTCGAGCGT CTGCAGAAGC TGACGGACGC CACGGCGGAA GGGCTCGACC GTTACGGCAT GCTGAGCGCC GAGGACGCCG AAAACCTGGA GAAGCTTTCC TCGTTGGCAG GCCAGCTTGA AACCATCGCC ATCAAGGAGC TGCAGGGCGA ACTGCCCACG GACGAGGAGT TCGAACTCAT CCGCAGCTAC GGCGGCCAGC TTGAGCATTT CTGGCAGACG GTGTACGAAG GCGAAGCTGA GGGCGAGAAT TTCACGGCGC GCGAATTCCC GGCGGCATTG GTGGCCGACA TCGCCACGGA TGCGCAGTCG GGCACCTGCC TCGAGGTGGG CGTGGGCGAC CTTTCAGAAG TGTTCGTAGT GGTGCCCATC GACGGCGAAC TGCATCTGAC CAGCGGCGTT GTATTCAGCT ATTACGAGTT CGAGCAGCCT ATCGCCGAGC GTCTGACCGA TTCCGAATGG CGCAAGATGA TGGGAATCGA TATCGGCGAC GACGGCAACT TCGCCAAGCC GGCCCAGGAC ATTGAGGAAT GGACCCGCGG ATTCCAGGTC GAGCGACCCC GGTAG
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Protein sequence | MFCPKCGNQL NQDDAFCGSC GAPVADRADA LQKAMPQPEA PAAQPPTQAP KKRVGAGMVA LAAVLLCGLV AIGATIAVLH GDDADESTAT TSQTAGQTST ATAADGQEVV SMERPVLISF TQESDAASVV PSVEPYAVED GLTNVVNANR FYLTDEEQDL VVQNGFAVSV GQAGYEFFDS YEMNRYSQTP NFVTVDSMMH TYHLYFSYLM KNTERDYLAP ALGEVSRAML DESLEQLAAA EGTGWEDAAL RNVAFFAVGA SLLDPSTEVP SQVEDVVSAE LAQIEDAAGI AESPLMGAGN MEDYSQYVVR GYYEGDEQLE SYFKAMMWYG RMNFAQKNED LDRSACLMAL ALQESGALAD WEGIYTVTSF FAGASDDCGF YEYYPILESV YGKTPSIDDL VENEDAWAEV HTLTADMPAP QINSIATGRD DDADYEEENK GYRFMGQRFT LDSAIFQKLV YNEVLANDAG EDRMLPCALD VPAALGSDEA LEILEEQGET GYENYSENMT ALREGLGSAD DDTLWSASLY SQWLYTLDPL LDVKGEGYPS FMANDQWTRK NLQSYLGSYS ELKHDTILYS KQVMAEMGGG EEPDVDDRGY VEPEPMVFER LQKLTDATAE GLDRYGMLSA EDAENLEKLS SLAGQLETIA IKELQGELPT DEEFELIRSY GGQLEHFWQT VYEGEAEGEN FTAREFPAAL VADIATDAQS GTCLEVGVGD LSEVFVVVPI DGELHLTSGV VFSYYEFEQP IAERLTDSEW RKMMGIDIGD DGNFAKPAQD IEEWTRGFQV ERPR
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