| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26160 |
|---|
| Symbol | |
|---|
| ID | 8396504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2885798 |
|---|
| End bp | 2886688 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644987358 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003144968 |
|---|
| Protein GI | 257065296 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGTG CGAAGAAGAT CCGCGATTTC AGATGCACGT ACGCGAACTC GGTTGGTGTG
AGCCCTGAGG TCACCCAGGG GCTTGACCTG GAGTTTCCCG ATGCCTACTG CCACCGCGAC
ACGATGGCCA CGCTGTCTTT GGCCATTAAG GAACACGATG GGGCGAATTT CTGCCTGCTG
CCCTTCTGCC GCACGGTGGA AGTTGAGGCC ATGGGCGGCA ACGTGAAGCT TGGCGATGCA
AAATCGTGCC CCCGCGCGGC CGATCCCGTC TGCGAGTCTT ACGAGGACTT CATGGCGCTG
CCTGACATCG ACTTCTCGCA GGGGCGCATC CGCGAGGTGC TGGAGGCGTG CCGCATCCTG
AAGCAGCGCG GCGAAACCGT GTGTCTTGAA ATCGTGGGAC CTTGGACCAT GATGCAGTCG
CTCATGGATG CGGCGAAGGT GTTCAAGATG TTCCGCAAAC AGCCTGATCA GGCGGTAGAG
GTTATGTGGA AGCTCGCCGG ACAGCTTCTT CCCTATGTGG ATGAGGCGCG CGAGTGCGGA
GTGGACGTCA TCACGCTGTC GGATTCCGCC GGCACGTTGA GCATCTTGGG CCCGCGCGTG
ATGGAGAAGT CGATGCTCTT GTTCATGGCG GATTTCGTGC GCGCCTTAGA CGAGCGCATC
GGCGGCAGCA TGGTGCTTCA GCTGTGCCCG AAGATCGCCT ACGCCCTTAT CGATACCGGA
TGTGCCGAGG TGAAGATTCA CGATCTTGGC GAATCCGTCG ACTTCCTGGA AGCGCTGCTG
CGCCTGCGTG GCGAGGCGCG CATTGTGGGC CAGACCTGCA TCAAGTACGT GGGCGTGAGG
GTCCTTAACG GCAAGATTCG CGAACTTGTG ATGAAGGAAC CCCAGGCCTG A
|
|---|
| Protein sequence | MVGAKKIRDF RCTYANSVGV SPEVTQGLDL EFPDAYCHRD TMATLSLAIK EHDGANFCLL
PFCRTVEVEA MGGNVKLGDA KSCPRAADPV CESYEDFMAL PDIDFSQGRI REVLEACRIL
KQRGETVCLE IVGPWTMMQS LMDAAKVFKM FRKQPDQAVE VMWKLAGQLL PYVDEARECG
VDVITLSDSA GTLSILGPRV MEKSMLLFMA DFVRALDERI GGSMVLQLCP KIAYALIDTG
CAEVKIHDLG ESVDFLEALL RLRGEARIVG QTCIKYVGVR VLNGKIRELV MKEPQA
|
|---|
| |