Gene Shel_25730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25730 
Symbol 
ID8396461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2845071 
End bp2846510 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content63% 
IMG OID644987318 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003144929 
Protein GI257065257 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATC TCGAGAACAT ATCATTCGGG TACAAAGGGA CCGACGCTAC GGGCGCCAAG 
CTCTGCACGA GCGGCGTGCG GGATGTGAGC CTGCACGTGG GCCCGGGCGA GTTCGTCGTG
GTGGCTGGCG GCTCCGGCTG CGGGAAAACC ACCATAACGC GCCTGATCAA CGGGCTGGTA
CCCCATTATT ACGAGGGCGA GCTCGAAGGG CGCGCCCAGG TGTGCGGCCT GGATGTGCGC
ACGACCAAGA TCAGCGACCT GTCGGCGCAC GTGGGAAGCG TGTTCCAGAA CCCGCGCAGC
CAGTTCTTCA ACGTGGACAC CACTAGCGAG CTGGCCTTCG CCTCGGAGAA CCGGTGCATC
GACCCGGACC AGATACGCGC CGACATCAGG CGAGTCGTGG GCGAGATGAA CCTGGAGCCC
TTGATGGACC GTAGCATCTT CGCGCTTTCG GGCGGCGAGA AGCAGAAGGT CGCCTGCGCA
TCGGTTGCCG TGGCCGAACC GGAAATCGTC GTGTTGGATG AGCCGTCGTC CAACCTGGAC
ACGGCTGGCA TCGACGATCT GCGCAGCGTA CTGGCCCTGT GGAAGAGCAA GGGCAAGACC
ATCGTGGTGG CCGAGCATCG GCTGTACTAC CTGGCCGACC TTGCAGACCG CCTGGTCATC
ATGAAGGAAG GCCGCATCGT TGAGGAGCTG GACGCCTCGC AGCTGGCATC CATGACCAGC
AAGGACGCCT ATTCGCGCGA GCTGCGAGCC TTCGATGCCG TGGACATTCC AGCCGGCCTA
CTGGACCGTG ACGCCAAGCG CGGGAACGCC GACACGCTCG TATGCCGTGA TTTCGAATTC
CGATATCGCA ACTCCGACAA CGGCATCAGC ATCCCGCACC TCGAATTCGG CGCAGGGCAG
ATCACGGCGA TCGTCGGGCG CAACGGAACA GGCAAGAGCA CCTTCGCCCA TCTGCTGTGC
GGCCTTTTGC GCAAGGGGCG CGGCACGGTC GAGTTCGGCG GACGCGTCTT CAAGCCGAAG
GAGCGCACGC AGCTGTGCTA CATGATCCTG CAGGACGTGA ACCACCAGCT GTTTACCAGC
AGCGTGCTTG AGGAGGTCGT GCTGAGCGCG CCCGCCGACA TGCCGCCTGA CCAGGCTGAA
TCACGTGCAA GAGAGGTACT CGAGCAGCTG GATCTGGCCC ATTTGGCCGA CGTGCACCCT
ATGGCGCTTT CGGGCGGGCA GAAGCAACGC GTCGCCATAG CCAGCGGCGT CATGGCGGAA
AACCCGGTGC TCATGTTCGA CGAACCCACC AGCGGGCTCG ACCTTCCCCA CATGCGCCAG
GTCGCGGACC TGCTGCGCAC CCTGCGAGAT GCAGGCAAGG TAGTCATCGT CATCACCCAC
GATACCGAGC TCATTCGCGA GGCGGCCGAC CGCGTAGTGG AGCTGCCTGT TCGAAACTAG
 
Protein sequence
MIHLENISFG YKGTDATGAK LCTSGVRDVS LHVGPGEFVV VAGGSGCGKT TITRLINGLV 
PHYYEGELEG RAQVCGLDVR TTKISDLSAH VGSVFQNPRS QFFNVDTTSE LAFASENRCI
DPDQIRADIR RVVGEMNLEP LMDRSIFALS GGEKQKVACA SVAVAEPEIV VLDEPSSNLD
TAGIDDLRSV LALWKSKGKT IVVAEHRLYY LADLADRLVI MKEGRIVEEL DASQLASMTS
KDAYSRELRA FDAVDIPAGL LDRDAKRGNA DTLVCRDFEF RYRNSDNGIS IPHLEFGAGQ
ITAIVGRNGT GKSTFAHLLC GLLRKGRGTV EFGGRVFKPK ERTQLCYMIL QDVNHQLFTS
SVLEEVVLSA PADMPPDQAE SRAREVLEQL DLAHLADVHP MALSGGQKQR VAIASGVMAE
NPVLMFDEPT SGLDLPHMRQ VADLLRTLRD AGKVVIVITH DTELIREAAD RVVELPVRN