Gene Shel_25410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25410 
Symbol 
ID8396429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2814680 
End bp2816008 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content59% 
IMG OID644987286 
Productglycine/sarcosine/betaine reductase component B alpha/beta subunit 
Protein accessionYP_003144897 
Protein GI257065225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000707635 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.515171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAA CCATTGGCAA TGTGTACGTG AAAGACGTCT GCCTTGGTAC TGAGAATTCC 
TTCGTTGACG GAATTCTGAC GATCAACAAA GACGACGCCA TTGCGTACCT GAAGGAAGAG
GACGACCATA TCACCGATCT TGATATCGTC ATCGCTCATC CGGGTGATGA CACGCGTATC
GTTCCGGTTA TCGAGACTAT TGAGCCGCGC GTCCGCATGG ACGGCCGCTG CCTGTTCCCT
GGCGTTACCG GCGAGCTCGA GCCCTGCGGC GACGGCGATC TGAAGGCCTT CAAGGGCTGC
TGCGTCACCG TTGTTGGTAA AGAGTGGGGT TCCTTCGGCG ACGGCGTCAT CGACATGGGT
GGCGAAGGTG CCAAGCACAC CTACTGGTCC AAGCTCATCA ACATCTGCCT GGTCGGCGAC
ACCGACGAGG AGTTCGAGCG TCACGAGCAG CAGAAGTGCA ACCATGCTCT GCGCTGGGCC
GGCCATCGTT TCGCCGAGTA CATCGGCAAG ATCGCCAAGG ACCTCGAGCC CGCTGACACC
GAAGTCTACG AGTTCGACCC CGTCCTGAAG CGCGACGATG CCCGCAAGGA TCTGCCGAAC
GTCGCTATCG TTCTGCAGCC CCAGTCCCAG ATGGAAGCCC TGGGCTACAA CGACCTGCTG
TATGGCTGGG ATATGAACCG CTACCTGCCC AGCTTCATCA GCCCCACCGA GATCTTCGAC
GGCTGCATCA TCTCCGGCTC GTTCATGCCT GCTTCCTCCA AGTGGTCGAC CTATGAGTTC
CAGAACTTCC CGACCATCAA GGAAATGTTC AAGTATGACG GCATCGAGTA CAACTTCGTC
GGCGTCATCA TGTCCAACCT GAACGTTGCT CTCGATCAGA AAGAGCGCTC CGCAATCATG
GTGCGCAACA TCGCTCTGAA CCTCGGCGTT GACTACGCAA TCGTCACCGA AGAGGGCTAC
GGCAACCCCG ACACCGACTA CGTCCGCTGC CAGGTCATCC TGGAGGACGC CGGCATCCCC
GTCGTCGGCA TCTCCAACGA GTCCGACGGC CGCGACGGCG CTGGCCAGCC GCTGGTTGTT
ATGGACGAGA AGACCAACGC TCTGGTCTCC ACCGGCAACG TGGGCGAGCT CACCGAGCTT
CCCGCTTGCG CCACCGTCAT CGGCAACCTC GAAGCCATGA ACCGCGACGG CATGTCCGGC
TCCTGGGGCT ATGACGAGAT CCTGGGCAAG TCCGCCCGCG ACGACGGCTC CATCATCATG
GAAGACAACA ACTGGTTCTG CGGAGACCAC ATCGCTGGCT TCTCCATCAA GACCATGCGT
GAAGTGTAA
 
Protein sequence
MKLTIGNVYV KDVCLGTENS FVDGILTINK DDAIAYLKEE DDHITDLDIV IAHPGDDTRI 
VPVIETIEPR VRMDGRCLFP GVTGELEPCG DGDLKAFKGC CVTVVGKEWG SFGDGVIDMG
GEGAKHTYWS KLINICLVGD TDEEFERHEQ QKCNHALRWA GHRFAEYIGK IAKDLEPADT
EVYEFDPVLK RDDARKDLPN VAIVLQPQSQ MEALGYNDLL YGWDMNRYLP SFISPTEIFD
GCIISGSFMP ASSKWSTYEF QNFPTIKEMF KYDGIEYNFV GVIMSNLNVA LDQKERSAIM
VRNIALNLGV DYAIVTEEGY GNPDTDYVRC QVILEDAGIP VVGISNESDG RDGAGQPLVV
MDEKTNALVS TGNVGELTEL PACATVIGNL EAMNRDGMSG SWGYDEILGK SARDDGSIIM
EDNNWFCGDH IAGFSIKTMR EV