Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25160 |
Symbol | |
ID | 8396404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2783252 |
End bp | 2784463 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987261 |
Product | acetate kinase |
Protein accession | YP_003144872 |
Protein GI | 257065200 |
COG category | [C] Energy production and conversion |
COG ID | [COG0282] Acetate kinase |
TIGRFAM ID | [TIGR00016] acetate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.748189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.886241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGTAC TGGTCGTAAA CGCAGGAAGC TCTTCTCTCA AGAGCCAGCT CATCGAGACC GAGACCAAAG AGGTTTCGAT GAAGTGCCTC GCCGAAAAGG TCGGCACTGA CGAGGCTTAC ATGAACGTGA GCTTCGCTCC TGATTTCAAG AAGAAGCGTT TCGAGATGGG CGGCCTTACC GTCGCCGGCT GCCTCGGCAA GCTGCTTGAG GTTCTGGGCA GCGACCCCGA CAGCCCCATT AAGAGCCTCG ACGAGATCGG CGCTGTGGGC AACCGCGTTG TTGCCGGTGG CGAGTACTTC ACCAGCTCTG CCGTCATCGA CGACGAGGCC CGTGCCAAGC TTCAGCTGTG CGAAGAGCTT GCTCCGCTGC ACAATCCCCA TGCAGACGCC TGCATCGACA TGGTGAAGGA GCTTCTGCCC AACACGCCGC AGGTCGCCGT GTTCGACACC GCTTTCCATT CCACCATGCC GCAGAAGGCT TTCATGTATC CTCTGCCTAT GCATTACTAC AACGAGTACC ATGTCCGCCG CTACGGCGCT CATGGCACCA GCCATCAGTA CGCCGCCCAG CGTGGCGCCG AGCTGGTCGG CCGTCCGGTC GAGGACCTGG GCATCATCAC CTGCCATCTG GGCAACGGCG GTTCCATCAC GGCCGTCGAG GGTGGCAAGT CCATCGACAC CACCATGGGC TTCACCCCGC TCGAGGGTCT CATGATGGGC ACCCGTTCCG GCCTGATCGA CCCTGCCATC GTGACCTACA TCATGCGCCG CGAGGGCAAG ACCCCCGATG AGATGGACAC TGTCCTGAAC AAGCAGTCCG GCGTTGCCGC AATCTCCAGC GTGGGCGGCG ACATGCGCGA CGTTCAGGCT GCCGCCGAGG CTGGCAACGA GCAGGCTCAG CTCGCCATCG ACATGTACGT GTACCGCATC CAGAAGGCCA TCGGCTCTTA CTTCGCCATC CTGCCTCATA CCGACGTCAT CGTCATGACC GCCGGTATCG GCGAGAACTC CGTTGAGCTG CGCGAAGCCA TCTTCGCTGG CCTGGAGCAT CTGGGCATGA AGCTCGACAA GGAGCTCAAC GCCGACCCCG AGGCCCGTGG CACGGACCGC GTCATTTCCG CAGAGGACAG CGCCGTCAAG ATCTGCGTGG TCTGCGCTGA CGAGGAAATG CGCATTGCTT CCGACACGGC AGAACTGGTC AGCCAGCTCT AG
|
Protein sequence | MLVLVVNAGS SSLKSQLIET ETKEVSMKCL AEKVGTDEAY MNVSFAPDFK KKRFEMGGLT VAGCLGKLLE VLGSDPDSPI KSLDEIGAVG NRVVAGGEYF TSSAVIDDEA RAKLQLCEEL APLHNPHADA CIDMVKELLP NTPQVAVFDT AFHSTMPQKA FMYPLPMHYY NEYHVRRYGA HGTSHQYAAQ RGAELVGRPV EDLGIITCHL GNGGSITAVE GGKSIDTTMG FTPLEGLMMG TRSGLIDPAI VTYIMRREGK TPDEMDTVLN KQSGVAAISS VGGDMRDVQA AAEAGNEQAQ LAIDMYVYRI QKAIGSYFAI LPHTDVIVMT AGIGENSVEL REAIFAGLEH LGMKLDKELN ADPEARGTDR VISAEDSAVK ICVVCADEEM RIASDTAELV SQL
|
| |