Gene Shel_25160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25160 
Symbol 
ID8396404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2783252 
End bp2784463 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content62% 
IMG OID644987261 
Productacetate kinase 
Protein accessionYP_003144872 
Protein GI257065200 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.748189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.886241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTAC TGGTCGTAAA CGCAGGAAGC TCTTCTCTCA AGAGCCAGCT CATCGAGACC 
GAGACCAAAG AGGTTTCGAT GAAGTGCCTC GCCGAAAAGG TCGGCACTGA CGAGGCTTAC
ATGAACGTGA GCTTCGCTCC TGATTTCAAG AAGAAGCGTT TCGAGATGGG CGGCCTTACC
GTCGCCGGCT GCCTCGGCAA GCTGCTTGAG GTTCTGGGCA GCGACCCCGA CAGCCCCATT
AAGAGCCTCG ACGAGATCGG CGCTGTGGGC AACCGCGTTG TTGCCGGTGG CGAGTACTTC
ACCAGCTCTG CCGTCATCGA CGACGAGGCC CGTGCCAAGC TTCAGCTGTG CGAAGAGCTT
GCTCCGCTGC ACAATCCCCA TGCAGACGCC TGCATCGACA TGGTGAAGGA GCTTCTGCCC
AACACGCCGC AGGTCGCCGT GTTCGACACC GCTTTCCATT CCACCATGCC GCAGAAGGCT
TTCATGTATC CTCTGCCTAT GCATTACTAC AACGAGTACC ATGTCCGCCG CTACGGCGCT
CATGGCACCA GCCATCAGTA CGCCGCCCAG CGTGGCGCCG AGCTGGTCGG CCGTCCGGTC
GAGGACCTGG GCATCATCAC CTGCCATCTG GGCAACGGCG GTTCCATCAC GGCCGTCGAG
GGTGGCAAGT CCATCGACAC CACCATGGGC TTCACCCCGC TCGAGGGTCT CATGATGGGC
ACCCGTTCCG GCCTGATCGA CCCTGCCATC GTGACCTACA TCATGCGCCG CGAGGGCAAG
ACCCCCGATG AGATGGACAC TGTCCTGAAC AAGCAGTCCG GCGTTGCCGC AATCTCCAGC
GTGGGCGGCG ACATGCGCGA CGTTCAGGCT GCCGCCGAGG CTGGCAACGA GCAGGCTCAG
CTCGCCATCG ACATGTACGT GTACCGCATC CAGAAGGCCA TCGGCTCTTA CTTCGCCATC
CTGCCTCATA CCGACGTCAT CGTCATGACC GCCGGTATCG GCGAGAACTC CGTTGAGCTG
CGCGAAGCCA TCTTCGCTGG CCTGGAGCAT CTGGGCATGA AGCTCGACAA GGAGCTCAAC
GCCGACCCCG AGGCCCGTGG CACGGACCGC GTCATTTCCG CAGAGGACAG CGCCGTCAAG
ATCTGCGTGG TCTGCGCTGA CGAGGAAATG CGCATTGCTT CCGACACGGC AGAACTGGTC
AGCCAGCTCT AG
 
Protein sequence
MLVLVVNAGS SSLKSQLIET ETKEVSMKCL AEKVGTDEAY MNVSFAPDFK KKRFEMGGLT 
VAGCLGKLLE VLGSDPDSPI KSLDEIGAVG NRVVAGGEYF TSSAVIDDEA RAKLQLCEEL
APLHNPHADA CIDMVKELLP NTPQVAVFDT AFHSTMPQKA FMYPLPMHYY NEYHVRRYGA
HGTSHQYAAQ RGAELVGRPV EDLGIITCHL GNGGSITAVE GGKSIDTTMG FTPLEGLMMG
TRSGLIDPAI VTYIMRREGK TPDEMDTVLN KQSGVAAISS VGGDMRDVQA AAEAGNEQAQ
LAIDMYVYRI QKAIGSYFAI LPHTDVIVMT AGIGENSVEL REAIFAGLEH LGMKLDKELN
ADPEARGTDR VISAEDSAVK ICVVCADEEM RIASDTAELV SQL