Gene Shel_24730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24730 
Symbol 
ID8396361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2739044 
End bp2740204 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content61% 
IMG OID644987219 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003144830 
Protein GI257065158 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA AGACAAACGG TATCATCAGC TCCAACGAAA TCACGAGGCG TAAGTTCATC 
AAATTCGGCG CCACCGGCGC CGCAACCGTT TCGCTCATCG GCATGTTCGG ATGCTCCAGC
ACCGAGGAGC CCGCAGAGCC TGAAGCCACC GAGGATGCAT CTTCCGAAAC CGCCGAACCG
ACAGCCGAAC CCGAGGCGAC CACGCAGGTC ATCACCGACC TGACCGGCGC CGAGGTCGAA
GTGCCCTTAG AAATCGAGAA AATCGCCGAC CTGTGGCATG CGCACAACCA GATCGTCATC
ATGCTGGGTG CCGGCGACAA GCTGGTCGGA ACCACCGAGA ACTTCAAAAA CCGCGCGTGG
GCGAACGTGG TGTACCCGCG TCTGGCCGAG GTCGAAGCGC TGGTCGTGGG CAGCGGCGCT
GGCGAAGTGA ACTACGAAGA GGCTTTGAGC TTGGAGCCCG ACGTGGTGTT CGCCTCCGAC
GAAGAAGTCA CCGAAAATGC TCGCAACCAG GGTCTGACCA CGGTCAACGT CATGTTCCAG
GACTACGAGG GCCTGCGCAA CAACGTCACC CTCACCGGTC AGGTGCTTGG CGCCGAGGCC
CAGGCGGCCG CCGATGCGTG GGCAGCCACG CTCGACGAGA ACATCGACCT GGTAGCCAGC
CGCACCGAAG GCATCGCCGA TGCGGACAAG CCTCGCATCC TGCACATCGT GAGTCCCCAG
AGCTACACCA TGGTCGACGG CACGAACACC ATCGTCGACG AATGGATTAA GCTTGCCGGC
GGCGTAAACG CCATTGAAAC CGAAGGAAAC CGTATCGAGC TGACCCTGGA AGAGATCCTC
GGCTCCGACC CCGACATCAT CATCATCGGC AGCGCCAAGC CTGAAGATGT CGATGCGTTT
TTGGCCGACG AGCAGTTCAG CGGCCTGACC GCCGTCCAGA ACGGTTTCGT GTACGCCAAC
CCCGAAGGCG TGTTCCCTTG GGACCGCTAC TCCGGAGAAG AAGCGTTGCA GATTCTGTGG
GCTGCCAAGT TCTTCAATCC CGACCTGTTC GAGGACGTCG ACATGGTGCA GAAGACCCAG
GAGTTCTACA GCAAGTTCTA CGGCTACGAC CTGACTGACG ACGAGGCGAC CCGCATCCTC
GAAGGCGAAC TGCCCGAATA A
 
Protein sequence
MSSKTNGIIS SNEITRRKFI KFGATGAATV SLIGMFGCSS TEEPAEPEAT EDASSETAEP 
TAEPEATTQV ITDLTGAEVE VPLEIEKIAD LWHAHNQIVI MLGAGDKLVG TTENFKNRAW
ANVVYPRLAE VEALVVGSGA GEVNYEEALS LEPDVVFASD EEVTENARNQ GLTTVNVMFQ
DYEGLRNNVT LTGQVLGAEA QAAADAWAAT LDENIDLVAS RTEGIADADK PRILHIVSPQ
SYTMVDGTNT IVDEWIKLAG GVNAIETEGN RIELTLEEIL GSDPDIIIIG SAKPEDVDAF
LADEQFSGLT AVQNGFVYAN PEGVFPWDRY SGEEALQILW AAKFFNPDLF EDVDMVQKTQ
EFYSKFYGYD LTDDEATRIL EGELPE