Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24500 |
Symbol | |
ID | 8396338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2715032 |
End bp | 2715640 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644987196 |
Product | transcriptional regulator |
Protein accession | YP_003144807 |
Protein GI | 257065135 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAACA GCGGTGACAT TATGTATAAA ACCTCTCATG ACCTGCGTTT TGTAAAAAAC CGTACCGCGT TGCGCCGTGC CTATATCGAC CTGGTCCAGG AGAAGGGTTC GTCCAGCGTG ACCGTGAAGG AGCTAGCTCA GCGGGCGAAC GTGAACCGCA TGACGTTCTA TGCGCATTAC GATACGGTCG ATGACATCCT TTGCGAATAC GTGGACGAGA TGACCTCGGC CATTCTGGAA AACAGCTCCA AATCAGGCGA AACCGATGTT GCGGGATTGT TCGAAGCGGC CACCGAGCAG ATGCGCCAGG AGATCGGATT TTTCAGGCTC GTGGCGAAAG AAGACGGGTT CGAGCTATTC AGAGGTCGAT TCCGCAACGC GTTCCGCCAT ATTTTCAAGG AGGAGCTGAT GCATGTTCCG GGCTTGTGTG GAACATGCCT GGAGCTGACG GCCGACATGA TCGCATCGGG CGTCACCTAC GCCTATTTCG GCTGGCTGGC GGGGGAGTAC GGGGACCTTC CCTTGGACGA GCTGGTGTCG CATTTCGAGG GCATGTACGG CGGCCTGCTT GGCGTTTATC CTGATGGGCA GAGGGGGAGT GGCCGGTAG
|
Protein sequence | MKNSGDIMYK TSHDLRFVKN RTALRRAYID LVQEKGSSSV TVKELAQRAN VNRMTFYAHY DTVDDILCEY VDEMTSAILE NSSKSGETDV AGLFEAATEQ MRQEIGFFRL VAKEDGFELF RGRFRNAFRH IFKEELMHVP GLCGTCLELT ADMIASGVTY AYFGWLAGEY GDLPLDELVS HFEGMYGGLL GVYPDGQRGS GR
|
| |