| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24280 |
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| Symbol | |
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| ID | 8396316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2687156 |
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| End bp | 2689816 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644987174 |
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| Product | EAL domain-containing protein |
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| Protein accession | YP_003144785 |
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| Protein GI | 257065113 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATG CCCTGGAAAT GCTCATCTCG CAAGCCGCCA AGGCTTTGAC GCGCACCCGA
GATGAAAGAA TGATAGAAGG TTTTCTCTCA GAGCTGGGCG AATTCCTGCA TTGTCGGAGC
ATCGCCGTGT CCTGCGATGA CGATGCGGGC CGGTACCGCT ACGGCCTGTA CTGGAACCAC
GACGAAGGCG TTAATGCCGT TACGTCATAC GCCGAGGCCA GCAAGCATGG TCTGGACATC
TGGCAGCAAT TCCTGGAGAC CAAAGGCGTG TTCGTGACAG ACGATGTGGA TTCGATTGCC
GACGAAGACC CCGCCGTCTA CCACGTGTTG AAGCAGGCGG GCGTGCAATC CGTGGTCGGC
TTCACCTTGG ATTTCATGGG GGCGAACTTC GGATTCGTGA TCATAGCCGA TCCTCAGAAC
CTGAACCTGT TCGAAGACGA CCTCGTTCTG GCTGGCATCC GTTTCGTCAT TGCATCGCTC
ATCTGCGGAA ACGACATGCG TCGGCAGCTT GATCAGCAGG GATACACCGA TGAGGTCAGC
GGTGCCGGCA ACAAGATGGG CCTGCGCCAT CGGATTGAGA GGATGGACAG GAGCGGAAGC
GTCGGGTTTG TGTGCTGCGG GGTGTGCGGC ATGGACGATA CGGGCCATCG CGTCCACATG
GAGCAAACGC TCATTCATGC CGAATCCGTC CTGCAAAGCG TGTTCGGCAA CGATGCGGTG
TTTCGTATCG ATTCGACGGA TTTCCTGGTG TTGGATACGG ACGATGACCG CACGGCGTTC
GGGGCGGAAC TCGACTTCGC AATCCGACTT ATGCAAGAAC GCGGCATCGA TGCGGCTTTC
GGCAGCAGGT TCGCCGAGGA ATGCGGAGAG TCCCTTAACG AGCTGATCGA TGCGGCAGTT
CGGGATATGC GACAGGAGAA AGAACGCATG CTCCAGCAGG GGCGCATTCA CGATGACGGC
TCCGACGACG AAGGCAGGAC CCAAGACCAT AGGGCAACCA TCCTCTTGCC CCAGGGGGAG
GACTTCTTCC GAGGGGCTGA GCAGTGGATT TCGACCATCT TCGATCACGA TGTGGCGGCG
ATTGCCGTCG ACATCAACTT CTTCCGCCTG TATAACGACA TCTTCGGGTG GCAAAGCGGC
AACGACCTTC TCGAAAAAAC AGCAGCGACG GTGGACGAGG TGGCTCGGCG ATTCCAGGGC
GTTGGCGGCT ATGTGGGCAA CGACGATTTC TGCTTGCTGC TTCCGGTTCC CATCGGTTCG
GACGCCGCTT TGGTCCAGAT TGTCGATCAG GTGGTCGACG CATTCGATTG CCCGGATGGA
TTCGCACATA TCTTCGGAGT CTGCCGACCG ACGGGTTTCT GCTCGAGCGC CATCGCGATG
TACGACCATG CAGCCGCGGC CATGGCCCAA ATCAAGGGCA GCTATGCCAA GCGGTGCGGA
TTCTACGATG CAGAGCGTTT CCAGGGCATA AAGGAAGCGA AAATGCTCCA GGTGGAAGCA
AAGCATGGCC TCCAAAACGG CGAGTTCCTG TTCTACCTGC AACCGAAGGT GAACGAGGGC
ACCGGACTCA TCGTGGGTGC AGAAGCGCTG GCTCGTTGGA ACCGGAATGG GCGGATTGTC
GGGCCAGACG TTTTCATTGG AGAAATGGAG CATAGCGGCC TGGTGTATTC GCTCGACCGC
TTCATTTGGG AAGAAGTGTG CAAATGGCAG CGCAACCTTA TCGATCGGGG GATTGCTCCT
CTGCCCGTAT CGGTAAACGT ATCGCGCGTC GATTTCTATT TTGCAGATGT TGCCCAGGAG
CTCATCGGTT TGGTGGAGAA ATATGGCATC GACCCGTCGC TCATCAACGT GGAGATTACC
GAAACGGCCT TGTCCGAGAA TCTGGACGAC CTTCGCGATG TCATCGTCCG CCTGCGCGAA
CACGGATTCT TCGTCTTTCT TGATGACTTC GGCAGCGGGT CGTCGTCTTT GAGCATGCTG
CATGCGCTTG ATATCGACGG CATCAAGACA GACATCCATT TCTTGAATCA AATGGGGCAG
GACGACCGCG CATCGAGCAT TGTCGAATCG GTCATCAGCA TGGCGCACAT GATCGGTTTG
GTGGTCGTAG CCGAAGGTGT GGAGCGGCAG GTCCAGCGCG ACACGCTTTT GAGCATGGGC
GACACGTATG CGCAAGGCAA CTATTTCTAC GAGCCCATGC CCGCCGAAGC GTACGAGCGG
CTGCTGTGCG ACCCGACCAA GCTGGGCGTG CCGCTGCATG CGAAGAAACC TCTGTTCAGG
TGCAAGCTGC ATTTTAGGGA CATGGTGTAC GAAGGAATCC TCAACGACAC GGTGCTGGAC
AGCATCGTCG GCGCTGCGGC GGTGTACAGG GAAGAAGGCG ACGTCATCTC CATCGTGCAG
ATGAACAAAG CGTTTTCCGA CCTGACCGGT ATCGACGCCG ACGACCGAAA GGCCATGGAG
AAGTTCATCC GTCTGTACTG CCAAGGTGAT GCGGCTGTGC TGCGCAAAGC GTTCCGCGAA
GCAGACCATT CCCTGGAGGG AAGGCCGGTG AAAGCCCGTT TCCATCGGTC CGACGGAAAC
ACGATTAAAC TGGAAGGGCG GATTTTCCTT CTGTATACGT TCGAAAAGCG CCGGCTGTAT
CTGTCCACCG TCAACAGCTA G
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| Protein sequence | MRNALEMLIS QAAKALTRTR DERMIEGFLS ELGEFLHCRS IAVSCDDDAG RYRYGLYWNH
DEGVNAVTSY AEASKHGLDI WQQFLETKGV FVTDDVDSIA DEDPAVYHVL KQAGVQSVVG
FTLDFMGANF GFVIIADPQN LNLFEDDLVL AGIRFVIASL ICGNDMRRQL DQQGYTDEVS
GAGNKMGLRH RIERMDRSGS VGFVCCGVCG MDDTGHRVHM EQTLIHAESV LQSVFGNDAV
FRIDSTDFLV LDTDDDRTAF GAELDFAIRL MQERGIDAAF GSRFAEECGE SLNELIDAAV
RDMRQEKERM LQQGRIHDDG SDDEGRTQDH RATILLPQGE DFFRGAEQWI STIFDHDVAA
IAVDINFFRL YNDIFGWQSG NDLLEKTAAT VDEVARRFQG VGGYVGNDDF CLLLPVPIGS
DAALVQIVDQ VVDAFDCPDG FAHIFGVCRP TGFCSSAIAM YDHAAAAMAQ IKGSYAKRCG
FYDAERFQGI KEAKMLQVEA KHGLQNGEFL FYLQPKVNEG TGLIVGAEAL ARWNRNGRIV
GPDVFIGEME HSGLVYSLDR FIWEEVCKWQ RNLIDRGIAP LPVSVNVSRV DFYFADVAQE
LIGLVEKYGI DPSLINVEIT ETALSENLDD LRDVIVRLRE HGFFVFLDDF GSGSSSLSML
HALDIDGIKT DIHFLNQMGQ DDRASSIVES VISMAHMIGL VVVAEGVERQ VQRDTLLSMG
DTYAQGNYFY EPMPAEAYER LLCDPTKLGV PLHAKKPLFR CKLHFRDMVY EGILNDTVLD
SIVGAAAVYR EEGDVISIVQ MNKAFSDLTG IDADDRKAME KFIRLYCQGD AAVLRKAFRE
ADHSLEGRPV KARFHRSDGN TIKLEGRIFL LYTFEKRRLY LSTVNS
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