Gene Shel_24260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24260 
Symbol 
ID8396314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2685092 
End bp2686018 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content62% 
IMG OID644987172 
Productdisulfide bond chaperone 
Protein accessionYP_003144783 
Protein GI257065111 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAACG TCATCGATTT CGAACATGAA CGCACAGCCG CAGGCGACTA CATCGTCCGC 
GGCGTAGCCG GCGACGGACA AATCCGCGCC TTCGCCATTA CGGCGCGCGA AAGCGTGCAG
GAGGCAAGCA CCCGCCACCA CACGAGCCCC GTGGCCACGG CCGCGCTGGG GCGCCTGCTC
ATGGCGGGCC AGATGATGGG ATGGATGTTC AAAAACCCTG ATGAGCTCAT CACGCTTACG
CTGGAAGGCG ACGGTCCGCT GTGCCCGGTC ACCGTCACGG CCGACAGCAC GGGCCGCGCC
AAGGGCTACG TGGCGCACCC CAATGTTTGG CTGGACCTGA ACAGCAAGCG CAAGCTCGAC
GTGGGCGGGG CCGTGGGATC CGGCATGCTG CTGGTGGTGC GCGACCAGCC GGGCATCGAA
CCCTATTCCA GCCGCGTCGA ACTGGTCAGC GGCGAAATCG GCGACGACTT GGTGCATTAC
TTCGTCACAA GCGACCAGGT GCCCACCACC GTAGGCCTGG GCGTGCTGGT CGACCGCGAT
CTAAGCGTGC GGCAGGCCGG CGGATTCATC ATCCAGCTCA TGCCCCACTA CGATGACGAG
CTGGTGGATC GCCTCGAACA GAACCTGGCG GGCGTGAGCA GCGTAACCGA TATGCTTGAG
CAGGGCATGA CCCCCGAAAC CATGCTCGAG CGGCTGCTCG CCGGGCTGGA TCCCATCATG
TTAGAAACCA CTCCTGCATC GTTTTATTGC GGGTGCAATG CAAAACGGGC GCAGCGTGCC
GTGCTTGCCC TGGGAGCTTC GGAAATCAAA GACATGATCG AAAAGAACGA ACCTGCTGAG
GTGTACTGCC ATTTCTGCGG AGACCGATAC GAGTTCACCC CCGATGAGCT TTCCGCCATG
CTCGGTTTCG ACCAGCAACT AAGCTAA
 
Protein sequence
MDNVIDFEHE RTAAGDYIVR GVAGDGQIRA FAITARESVQ EASTRHHTSP VATAALGRLL 
MAGQMMGWMF KNPDELITLT LEGDGPLCPV TVTADSTGRA KGYVAHPNVW LDLNSKRKLD
VGGAVGSGML LVVRDQPGIE PYSSRVELVS GEIGDDLVHY FVTSDQVPTT VGLGVLVDRD
LSVRQAGGFI IQLMPHYDDE LVDRLEQNLA GVSSVTDMLE QGMTPETMLE RLLAGLDPIM
LETTPASFYC GCNAKRAQRA VLALGASEIK DMIEKNEPAE VYCHFCGDRY EFTPDELSAM
LGFDQQLS