Gene Shel_24230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24230 
Symbol 
ID8396311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2683140 
End bp2683892 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID644987169 
Productnitroreductase family protein 
Protein accessionYP_003144780 
Protein GI257065108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGT ACGAAGCGAT TGCGACGCGT ATTTCATGCC GGGCCTATGA CGGCCGTCCG 
GTGGAGCCGG AAAAGGTGGC GGTCCTCCAG GAGGAGGTCA GTCGGATCAA TGCCGAATCG
GGCCTGCACA TTCAGCTGTA CGGTCCTCGT GAGGACGGCT TCGTCATAGA GATGAACCAG
GACATGTTCG CGGGCGACAT TCCGATGTAC GCTGCAGTGG TAGGCCTTAG CACGCTGGAC
GCCATGGAGA AGGCGGGCTA CTACGGCGAG CGGCTGGTTC TGCTGGCTAC CGCGCTTGGG
CTGGGCACGT GCTGGGTTCG AAGCACCTTC AACCGCGACA CCGCCCGCGC CGAACTTGCC
GAAGACGAGG ATCTTCTGGA CGTGATCCCC ATCGGGTATG CGCCGGCGGA GATGCCCGAG
GTGCAGCAGA AGATCCGCGC CAACATACGC GCCCGGGACA AGAAGCTCGA GACGCTGTAC
CAGGGTCCCG TAGCCCTTGG CGAAGCTCCC GAATGGATCC GCATTGCGAT TCGCGACGTG
CAGCTGGGGC CGTCCGCCGT CAACCGTCAG CCCATCGCGT TTACGCAGGA ATCCGCCGAT
GCTCCTGTTC GGGCGATTAT TGCGGACAAG GGACGTTTGG TGAGCTATGT CGACTTAGGC
ATCGCGAAGC TCCATTTCGA ACTGTCCGCC GCTGCCCACG GCATGCCCGG CGCCTGGGAA
TGGGGCGAGG GCGGAGCCTT CGTTCTGGCA TGA
 
Protein sequence
MDLYEAIATR ISCRAYDGRP VEPEKVAVLQ EEVSRINAES GLHIQLYGPR EDGFVIEMNQ 
DMFAGDIPMY AAVVGLSTLD AMEKAGYYGE RLVLLATALG LGTCWVRSTF NRDTARAELA
EDEDLLDVIP IGYAPAEMPE VQQKIRANIR ARDKKLETLY QGPVALGEAP EWIRIAIRDV
QLGPSAVNRQ PIAFTQESAD APVRAIIADK GRLVSYVDLG IAKLHFELSA AAHGMPGAWE
WGEGGAFVLA