Gene Shel_24220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24220 
Symbol 
ID8396310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2681640 
End bp2683067 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content64% 
IMG OID644987168 
ProductNAD/NADP transhydrogenase beta subunit 
Protein accessionYP_003144779 
Protein GI257065107 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA TGCTTTCCCA ATTCGAAACC GTCGCATGCA TCGTTGCGGC GCTTCTGTTC 
ATCCTGGCGT TGGCAGGCCT CTCCCAGCAG AAAACCGCCA ACCGCGGCAA CCTCATGGGC
ATGTGCGGCA TGGCGTTGGC GCTGGTCGCC GTCATCGTTG TGGCCGTGGC GAACGCCTCC
GATGCGGCTT GGCAGGCATT AGGTCTGATC ATCGCGGCAA TCGCCGTGGG CGGTGCCTTC
GGCGCCTGGC GGGCCGTCAA GGTTCAGATG ACCCAGATGC CCGAGCTTGT GGCCATGCTG
CACTCCTTCG TCGGCGCGGC CGCCGTCTTG GTCGGGTTCA ACTCGTTCCT CACCGAGCCC
GGCGGATACT TCGAAGGCAG CATGAACGCC TACCATCTGG GCGAAGTCGG CTTGGCCGTG
TTCATCGGCG CCGTGACGCT CACTGGATCC ATCGTCGCGT TCCTGAAGCT TTCGGCACGC
ATCTCGGGCA AGCCGCTCAC GCTGCCCGGA CGCAACATCA TCAATCTGGT CATGCTGGCG
GCCGTTATCG TGCTCATCGG CGTGCTCATC AACACCACCG GCGTGCAGGC GGGCCTGGTT
CCGCTGTGCA TCATCACGGT GATTTCGCTG GTACTGGGAG CCCACCTGGT GCTCGCCATC
GGCGGCGGCG ACATGCCCGT GGTCGTGTCC ATGTTGAACT CCTACTCAGG CTGGGCTGCG
GCCATGGCCG GCTTCACCCT GGGCAACGAC CTGCTTATCA TCACGGGCTC GCTGGTGGGC
TCGTCGGGCG CGTACCTGTC CTACATCATG TGCCAGGGCA TGAACCGCTC GTTCATCTCG
GTCATCCTCG GCGGCTTCGG CGCAGATGCT CCCGCATCGA CCGGCCAAGC TAAGGACTAC
GGCACCCATA CCGAAACCAC CCCCGCCGAA GTGGCGCAGC TGCTTAAGGA CGCCAAGCGC
GTGGTCATCA CGCCCGGCTA CGGCATGGCG GTCGCCCAGG CCCAGTTCCT GGTCGCCGAC
ATGACCCGTA GGCTTATCGC CTCCGGCGTG GACGTCAAGT TCGGCATTCA CCCCGTTGCA
GGTCGCATGC CTGGCCATAT GAACGTGCTG CTGGCCGAGG CGAAGGTGCC CTACGACAAC
GTGTACGAGA TGGATGAGAT CAACGACGAC TTCGGCGATG TGGACGTGGT GCTGGTCATC
GGCGCCAACG ACACGGTGAA CCCCGCCGCC GAAACCGAAC CCGACTCCCC CATCGCCGGC
ATGCCCGTGC TGCGCGTGTG GGAGGCCGAA AAGGTCATCG TGTTCAAGCG CTCCATGGGC
AACGCTGGCT ATTCCGGCGT GCAGAACCCG CTGTTCTTCA ACGAGAACAC CGACATGCTG
CTGGGCGACG CCAAGGAGTC CATGGCCGGC ATCGTTGAGG CCCTGTAA
 
Protein sequence
MTEMLSQFET VACIVAALLF ILALAGLSQQ KTANRGNLMG MCGMALALVA VIVVAVANAS 
DAAWQALGLI IAAIAVGGAF GAWRAVKVQM TQMPELVAML HSFVGAAAVL VGFNSFLTEP
GGYFEGSMNA YHLGEVGLAV FIGAVTLTGS IVAFLKLSAR ISGKPLTLPG RNIINLVMLA
AVIVLIGVLI NTTGVQAGLV PLCIITVISL VLGAHLVLAI GGGDMPVVVS MLNSYSGWAA
AMAGFTLGND LLIITGSLVG SSGAYLSYIM CQGMNRSFIS VILGGFGADA PASTGQAKDY
GTHTETTPAE VAQLLKDAKR VVITPGYGMA VAQAQFLVAD MTRRLIASGV DVKFGIHPVA
GRMPGHMNVL LAEAKVPYDN VYEMDEINDD FGDVDVVLVI GANDTVNPAA ETEPDSPIAG
MPVLRVWEAE KVIVFKRSMG NAGYSGVQNP LFFNENTDML LGDAKESMAG IVEAL