| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24100 |
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| Symbol | |
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| ID | 8396298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2667773 |
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| End bp | 2668366 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987156 |
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| Product | isopentenyl-diphosphate delta-isomerase, type 1 |
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| Protein accession | YP_003144767 |
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| Protein GI | 257065095 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTCG AACATGTCGT CGAATGCAAC CGGCAGCCTG ATCCGATGGC TAGCGATCCG
GCCAAAAGCG ACGAACTCAT CCTCGTGGAC GTGTTCGACA ACCCTGTGGG CACGGCTTCC
AAAGAGCGCG TCCATCGGGA AAGCCTGCTT CATCGGGCAT TCTCGGTCGT CTTGGTGCGC
GACGGCGCAT CCGGGCCGGA GGTGCTGGTC ACCCGCCGCG CGCCGTGCAA GTACCACTCC
GCGGGGCTTT GGACCAATTC GTGCTGCTCG CACCCGCGAG TCGGAGAAAG CACCGTCGAC
GCAGCCTATC GCCGCGTTGC CCAGGAGTTG GGCGTGCAGG CCCGTGACCT GCGGGAAATC
GGTTCATTCA TCTATAGGGC GTCGTTTCCT TCAGGCATTG CCGAATACGA ATACGATCAC
GTGTTCGTCG GAGGATGCGA AGGCGAGCTT CGCCCCGACC CCTCCGAAAC CGACGGGGTG
CGGTGGATGC CCCTTGCCGA CCTGGCGGAC GAGCTAATCA TGCAGCCCGC CGCCTTCGCC
CCCTGGTCTT TAACCGTGTT CCCCATGGTC TTGGTCTTCC TGGCCGACCG ATAA
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| Protein sequence | MNVEHVVECN RQPDPMASDP AKSDELILVD VFDNPVGTAS KERVHRESLL HRAFSVVLVR
DGASGPEVLV TRRAPCKYHS AGLWTNSCCS HPRVGESTVD AAYRRVAQEL GVQARDLREI
GSFIYRASFP SGIAEYEYDH VFVGGCEGEL RPDPSETDGV RWMPLADLAD ELIMQPAAFA
PWSLTVFPMV LVFLADR
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