Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23700 |
Symbol | |
ID | 8396259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2626270 |
End bp | 2627328 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987117 |
Product | hypothetical protein |
Protein accession | YP_003144728 |
Protein GI | 257065056 |
COG category | [R] General function prediction only |
COG ID | [COG3081] Nucleoid-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000660407 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.616861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA ACCACGCCAT CCTGCATGTT TTCGACTTCA TCTCCTGCGT CAACGTATTC GCCACCGAAG AGGTGAACTT GGAAGACAAA AGCGCGAAAA GCTACATTTC GAAACATGCG AACAAGGCTC TGAACAGCCT GGACAACAAG CATGGCGTGT TTTACGAGGA CAGCATGTTC GCCGAGGAGC TGCAGGCGTA CGCCCAAGGG CAGCGCAGTT TCATGGACAT GTCCCGCAAG ATTGCAGACT ATCTGGCCGA CGAGCTGGGC CGTCAGCAGA AAGCCGACTC CACCGACCTG CTCATCGTCG ATTTCGAGGT GCCTGTCAAC GGCAACCAAG GCGGCGAAGC CACCGACGAA GAGGTGGACG CATCCTTCGA AGGCCAGGCC ATGCGCTATT TCGCCATCCT GCTGCTGGAC AGCAAGCAGG CCTACATGCA TGAGGTGGGC CGCGGAGACG GCGGCCGCAA CGACATCGCC CGCCACTTCG CCATCCTGCC GAGCCCCTCG CAGAAGGTGC AGTCCTACGC CGTGATCGAC CTGATGACCG GCGGCGTAAC TTTGTCCGAC AAGAAACGCC TGATTGCCGG CGAAGAGCGC TTCCTCCTGG CGGACGGCCT GCTGCAGTGC TCCATGGAGG CGTCCAGCAA GGAGGCCTTC TCCGCAGTGG CCGACGTGGT GGAAACCGTG GCCAACGAAT ACGGCGCCAA CAGTGCTTTG GCGCTTTCCA GGGCGAAGGC GTACGCTGCC GAAGTGGCCT TCGACGACGG GGACTTCGAT TTGGACGAAC TGGGCCGCGA AGTGTTCGAC GGCCGCAGCG ACATGATGGG GCGCTTCGAC GAATACGCCG CCGAGGAGCA CCTTTCCGGA AAGATGAAAC TGGACAAGGC CGCCGTGCAG CGCTTCACCA AGAACCACAA GATTCGCACC GACACGGGCA TCGAGATCAC CTTCCCCGCA GAATACGGGC GCAACCCCGA CTTCATCGAG TTCATCAGCG AGCCTGACGG GCGCATTTCC ATCTCGTTGA AGAACATCGG CTACATCGAG AACCGCTAG
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Protein sequence | MKINHAILHV FDFISCVNVF ATEEVNLEDK SAKSYISKHA NKALNSLDNK HGVFYEDSMF AEELQAYAQG QRSFMDMSRK IADYLADELG RQQKADSTDL LIVDFEVPVN GNQGGEATDE EVDASFEGQA MRYFAILLLD SKQAYMHEVG RGDGGRNDIA RHFAILPSPS QKVQSYAVID LMTGGVTLSD KKRLIAGEER FLLADGLLQC SMEASSKEAF SAVADVVETV ANEYGANSAL ALSRAKAYAA EVAFDDGDFD LDELGREVFD GRSDMMGRFD EYAAEEHLSG KMKLDKAAVQ RFTKNHKIRT DTGIEITFPA EYGRNPDFIE FISEPDGRIS ISLKNIGYIE NR
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