Gene Shel_23690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23690 
Symbol 
ID8396258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2625112 
End bp2626128 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content60% 
IMG OID644987116 
Productpredicted transcriptional regulator 
Protein accessionYP_003144727 
Protein GI257065055 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000476892 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.626882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTC GCGACAATCT TCAATACCTG CGTTCGACCC GCAGCATGAC CCAGGAGCAG 
CTCGCCATGA TGGTGGGCGT TTCGCGCCAG TCCGTCACCA AGTGGGAGTC CGAACGGGCC
TACCCTGAAA TGGACAAGCT CCTCAAAATC AGCCAGATCT TCGACTGCAC CATCGACGAA
CTGGTTCAGG GCGACCTGAC CCATCGGGAC ATCCAGCCCG AAAAGGCCAT GCCGGTGGAC
ATGTCTTCCG ACAGCATCGG CTATGTCGAC CGTTTCAAGG TGCACGCCCG TCTGATCTCC
ATCGGTGTAG GATGCTTCAT CATCGGATGC GGACTTGGAC TTTTGCTCAC GGGCCTGTTG
CAGACCATCG GCTTCTCCAC CCAGGTCGAG ATTCTCCTGC CCGTCCTGGT GCTCGCCTTC
GTCATCGCCG GATTGGCCTT CGTCATCCCC GAATCCACAC GGCACACCCT GTTCATGAAG
GAGCATCCCT ACATCATCGA CTTCTTCTCC TCCGAAGAGC GGATGGAAAA CGGCGTGCGC
ACATCCCGCG GCATCGTTTT GGGCACGGGC ATCATCCTGG CGAGCCTCAT CCTGGTGTTC
GTGTTCGGCG AACGCATCGA CGGCATCGAG CCGCTGGAGG AGATCGTGTC CGGAATCATG
CTCATCGGCA TCGCCGTGGG CGTGGGGTTC ATCGTCTACT TCGGCATCCT GTCCGACATG
ACGAACATCG CCGAGTACAA CGTGAGCGCC CTGTGCGAAC TGACCGATGA AGAGGCCGTC
GAGCTGCTGG ACGACCGCGA CGCCTCCGAG CGCGAGCGCC TGCTGGCAAA ACGCCGTATC
AACAAGATCG TGGGCGCAAG CTGCGGCATC ACCATGGTCA TCGCCACCAT CGCCGGCTTG
GTCCTGCTCT TCTCGGAATT CGAGTTTTTC TGGATGGCCT GGTGCGTCGG CGGCCTCATC
TGCGCCGTGA TCGCCATCGT CGGCAGCATT CTGGCCCCCA AGCCGAACGC CGCATAG
 
Protein sequence
MSFRDNLQYL RSTRSMTQEQ LAMMVGVSRQ SVTKWESERA YPEMDKLLKI SQIFDCTIDE 
LVQGDLTHRD IQPEKAMPVD MSSDSIGYVD RFKVHARLIS IGVGCFIIGC GLGLLLTGLL
QTIGFSTQVE ILLPVLVLAF VIAGLAFVIP ESTRHTLFMK EHPYIIDFFS SEERMENGVR
TSRGIVLGTG IILASLILVF VFGERIDGIE PLEEIVSGIM LIGIAVGVGF IVYFGILSDM
TNIAEYNVSA LCELTDEEAV ELLDDRDASE RERLLAKRRI NKIVGASCGI TMVIATIAGL
VLLFSEFEFF WMAWCVGGLI CAVIAIVGSI LAPKPNAA