Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23540 |
Symbol | |
ID | 8396243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2606581 |
End bp | 2607375 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987101 |
Product | hypothetical protein |
Protein accession | YP_003144712 |
Protein GI | 257065040 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.373892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00287708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCTGCC CTCATTGCGG TACCCAGTTG CCTGACGGAT CCCAGTTCTG CGGCAAGTGC GGATCCCGGC TCAACGCAGC CGCTCCGACG CAGGCCAACA CGTATGGAGC ATACGCCGCT CCGGCGCCGG CTCCGAAGTC GAAGAAGCCG ATTGCTATCA TCGCGGCGGC AGCTGCGGCT GTGGTGCTGG TGGCGGCGCT CGGCATCTCG GCATTCGCGG GCGTAGGTCC GTTTTCGGGG TCAGGTGGCC TGATAGGCAA ATCGAACGAC GGCATCGCCG GCACCTACAA GCTGGGCGGC GAAGGCGGAC GCGAGCTGAT CGGAACCAGC GTGAGGGTCA CCATTGACGA AGAAGGCGTG GCTGTGCTCG ATACGGGTGA CGGAAGCATT ACGGGCACGA TGGAAGAAGT CGAGGAAATC GGCGGCAGCA CGCTGTACGA GCTTACGAAC CTGACAGATG GCGAAGGTGA GGATATCACC GACCTGTCCG CATCCGTGCT GCTGGGCAAC GGCATTCCCG AAGGCGATTA CACGGGCGAT TGGCGCATCT CCTTCGATTT CGGAGATGGC GAGGTCGAAA CCTACGGCAT CGAGATCGAC GAGGACGGCA CGGCTGTGTT CGGTTTCGGC AATTGCGGCA TCGATGATTG GGATCCGAGC GAGACGGTCG ACTTGACCTG GGAAGAGACC GACGACTTCG AATACACCTT CTACATTGAC GACGCTGATG TTGTGGATGC GAGCGAAGCC GAAGACTACC CCTTCGAGTT CTCCTACAGC CCCGCGTCTG AATAA
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Protein sequence | MFCPHCGTQL PDGSQFCGKC GSRLNAAAPT QANTYGAYAA PAPAPKSKKP IAIIAAAAAA VVLVAALGIS AFAGVGPFSG SGGLIGKSND GIAGTYKLGG EGGRELIGTS VRVTIDEEGV AVLDTGDGSI TGTMEEVEEI GGSTLYELTN LTDGEGEDIT DLSASVLLGN GIPEGDYTGD WRISFDFGDG EVETYGIEID EDGTAVFGFG NCGIDDWDPS ETVDLTWEET DDFEYTFYID DADVVDASEA EDYPFEFSYS PASE
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