Gene Shel_23540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23540 
Symbol 
ID8396243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2606581 
End bp2607375 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID644987101 
Producthypothetical protein 
Protein accessionYP_003144712 
Protein GI257065040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.373892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00287708 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCTGCC CTCATTGCGG TACCCAGTTG CCTGACGGAT CCCAGTTCTG CGGCAAGTGC 
GGATCCCGGC TCAACGCAGC CGCTCCGACG CAGGCCAACA CGTATGGAGC ATACGCCGCT
CCGGCGCCGG CTCCGAAGTC GAAGAAGCCG ATTGCTATCA TCGCGGCGGC AGCTGCGGCT
GTGGTGCTGG TGGCGGCGCT CGGCATCTCG GCATTCGCGG GCGTAGGTCC GTTTTCGGGG
TCAGGTGGCC TGATAGGCAA ATCGAACGAC GGCATCGCCG GCACCTACAA GCTGGGCGGC
GAAGGCGGAC GCGAGCTGAT CGGAACCAGC GTGAGGGTCA CCATTGACGA AGAAGGCGTG
GCTGTGCTCG ATACGGGTGA CGGAAGCATT ACGGGCACGA TGGAAGAAGT CGAGGAAATC
GGCGGCAGCA CGCTGTACGA GCTTACGAAC CTGACAGATG GCGAAGGTGA GGATATCACC
GACCTGTCCG CATCCGTGCT GCTGGGCAAC GGCATTCCCG AAGGCGATTA CACGGGCGAT
TGGCGCATCT CCTTCGATTT CGGAGATGGC GAGGTCGAAA CCTACGGCAT CGAGATCGAC
GAGGACGGCA CGGCTGTGTT CGGTTTCGGC AATTGCGGCA TCGATGATTG GGATCCGAGC
GAGACGGTCG ACTTGACCTG GGAAGAGACC GACGACTTCG AATACACCTT CTACATTGAC
GACGCTGATG TTGTGGATGC GAGCGAAGCC GAAGACTACC CCTTCGAGTT CTCCTACAGC
CCCGCGTCTG AATAA
 
Protein sequence
MFCPHCGTQL PDGSQFCGKC GSRLNAAAPT QANTYGAYAA PAPAPKSKKP IAIIAAAAAA 
VVLVAALGIS AFAGVGPFSG SGGLIGKSND GIAGTYKLGG EGGRELIGTS VRVTIDEEGV
AVLDTGDGSI TGTMEEVEEI GGSTLYELTN LTDGEGEDIT DLSASVLLGN GIPEGDYTGD
WRISFDFGDG EVETYGIEID EDGTAVFGFG NCGIDDWDPS ETVDLTWEET DDFEYTFYID
DADVVDASEA EDYPFEFSYS PASE