Gene Shel_23160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23160 
Symbol 
ID8396205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2568229 
End bp2569650 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content62% 
IMG OID644987063 
ProductABC-type cobalt transport system, ATPase component 
Protein accessionYP_003144674 
Protein GI257065002 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.452104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATT TCGACCACGT GACCTTTACC TACGAAGGGC AAAGCTCCCC AAGCCTGACC 
GACGTGTCGC TGCAGGTGCC GCGCGGTGCC TGCGTTTTGG TAAGCGGCCC CTCGGGCTGT
GGGAAATCCA CGCTGCTGCG CCTGGTCAAC GGGCTAATCC CGCACTTTTA CGAGGGGATG
CTGGAAGGCC ACGTGTTGGT GGAAGGCACC GCGCCGTCAG ACGCGCCCCT CTACGATCAG
GCGTCGCGCA CCGGATCGGT GTTTCAGAAC CCGCGAACGC AGTTCTACAC CACCGACACC
ACGAGCGAAA TTGCCTTCGC CCTGGAAAAT CAGGGCATTC CCGCCCCGCA GATCATCGGC
CGCGTCGAAC AGGTGGCCTG CGACATGGGG CTTGCGCCCC TGATGGACCG CAGCCTGTTT
GCCCTGTCCG GAGGCGAGAA GCAGAAGATC GCCTGCGCGT GCGTGAACGC CGCCCAGCCT
GACGTGATTG TGCTGGATGA GCCTACGGCG AACCTCGACT ACGACGCATC GCTGGCGTTG
GCGCAGCTCA TAGCCGAGTG GAAGCGCTGC GGGAAAACCG TTCTGATTGC CGAGCACCGC
ATCGCATGGG TGCTTGACCA GGTGACGCAG CTGGTCATCA TGAACGACGG CCGCATAACG
GACGTCCTGG ATGCAGCTTC GCTCGCGGGC GTCGATGCTG GCCGCTGCCG TGCCCATGGT
TTGCGGACCC CCGTTCTGGC CAGCCCCGAT GCTGTCGATA TCCCACGGTT TGACCTGGAG
GCAAGCCGTC ATGAGGCGTG GTCTGTGGAC GACTTGCATT TCGGGTACGA CAAAGGGAAG
ACCGTTCTCG ACTTCAATCG CATCGACCTG GCGAAAGGCG CGATCACAGC CGTTGTCGGA
CGAAACGGAC GCGGCAAGAC CACGTTTCTG CGCTGCCTGA CCGGGCTTGA GCGCAAGGAT
CGAAGCATCG TGCATTTCGA CGGGCAGATC TGGGACCGCA AAGCCCGACT CGACAACGTT
TTTCTCGTGC GTCAGGACGT GAACTGCCAG CTGTTCACGC AAAGCGTGGC CGAAGAGGTT
GAGATAAGCC TGCCGCCTGC GGAAACAGCG TCGATGTCCG ACGAGGAACG CACGGACCGC
ATCAATTCCA TCCTATCGTC GCTGGACTTG GCCGACCTGG CACAGCGCGA CCCGTTCACG
CTGTCGGGCG GACAGAAGCA GCGCGTTGCC GTGGCATGCG CCGTAGCGTC GGGACGACCC
ATAATCGCAT TCGACGAACC CACCAGCGGA CTTGGCCTCG ACCATATGCT GCGCTTTGCG
GATCTGCTGC GGCGCCTGGT CGAACAAGGC CGGACCGTCA TCGTGGTCAC CCACGACGCC
GAGCTCATCC AAACCGCCGC CGATTACCTG TTGGTGCTTT AG
 
Protein sequence
MINFDHVTFT YEGQSSPSLT DVSLQVPRGA CVLVSGPSGC GKSTLLRLVN GLIPHFYEGM 
LEGHVLVEGT APSDAPLYDQ ASRTGSVFQN PRTQFYTTDT TSEIAFALEN QGIPAPQIIG
RVEQVACDMG LAPLMDRSLF ALSGGEKQKI ACACVNAAQP DVIVLDEPTA NLDYDASLAL
AQLIAEWKRC GKTVLIAEHR IAWVLDQVTQ LVIMNDGRIT DVLDAASLAG VDAGRCRAHG
LRTPVLASPD AVDIPRFDLE ASRHEAWSVD DLHFGYDKGK TVLDFNRIDL AKGAITAVVG
RNGRGKTTFL RCLTGLERKD RSIVHFDGQI WDRKARLDNV FLVRQDVNCQ LFTQSVAEEV
EISLPPAETA SMSDEERTDR INSILSSLDL ADLAQRDPFT LSGGQKQRVA VACAVASGRP
IIAFDEPTSG LGLDHMLRFA DLLRRLVEQG RTVIVVTHDA ELIQTAADYL LVL