Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23050 |
Symbol | |
ID | 8396194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2555199 |
End bp | 2556146 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987053 |
Product | predicted integral membrane protein |
Protein accession | YP_003144664 |
Protein GI | 257064992 |
COG category | [S] Function unknown |
COG ID | [COG5523] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.980655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACCA GGAAAGAATT GAAGGAAAAG GGCAAATGGG CCCTGAAGCA GAACTATTGG AAAGCCGTGC TGGTCGGGTT GCTGCTGATG GCGATTTCCG GCAGCTTGTT CGGCGGCCCC GCACCTGGAG GCTCGCCGAT CGATGATGAC AATTACACCA TCGAGACCGA AGCCGACAGC GTATCCGTCG TCGATACCGA AAACGACCTT GCCTACGAGA TCTACACCGA TTCGCCCATG GCGGGCCCCG AAGTCGCCGT TCTCGCCGCT AGCTTCGGCC TCGTGCTCTT GCTGGTGTTC GCAGTCCTCC TGGTGATGAG CTTCTTTATC TTCAACCCGC TCATGGTGGG TGTCCAGAGG TTCTTCCTGC GCGATTTGAA CCAGCGGGCC CTGGTCAAAG AGGTTGCCTA CGGTTTTGAC AACAATTACC GCGAGAATGT GAAGACCATG TTCTTCCGTG ACCTGTTCAT CTTCCTGTGG AGCCTGCTGC TCATCATCCC CGGCATCGTC AAGTCGTATG AGTACCGTAT GATTCCGTAC CTGCTTGCCG ACGATCCCAC CATGACCAAG GACGTCGCGT TCGCCGAGAG CAAGCGCATG ATGACCGGCC AGAAGTGGAA CGCCTTCGTG CTCGACCTGT CCTTCATCGG CTGGTGCATC CTGTCCATCT TCACGCTGGG CATCCTGAGC ATCTTCTACG TGGCTCCCTA CCAGGCGCAC ACGAACGCGG CCCTGTACGA GAAGCTCCGC TACGGCATGC CCGCACCTGA GAGCGTTGCC GCCGCGCCCC AGCCGGCAGC CGCCGATCCG ACCGCTGCCG CTGCCGCGCC GGTGTTCGTT CCCGCAGCTC AGCCTCCGGT GCCTTCCTTC GCAGCTACCG ACGCACCGGT GGCAACCCAG GCCGAAAACG GCGAAAGCCC CGTTGCGCCC GACGGTCCGC AAGCGTAA
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Protein sequence | MWTRKELKEK GKWALKQNYW KAVLVGLLLM AISGSLFGGP APGGSPIDDD NYTIETEADS VSVVDTENDL AYEIYTDSPM AGPEVAVLAA SFGLVLLLVF AVLLVMSFFI FNPLMVGVQR FFLRDLNQRA LVKEVAYGFD NNYRENVKTM FFRDLFIFLW SLLLIIPGIV KSYEYRMIPY LLADDPTMTK DVAFAESKRM MTGQKWNAFV LDLSFIGWCI LSIFTLGILS IFYVAPYQAH TNAALYEKLR YGMPAPESVA AAPQPAAADP TAAAAAPVFV PAAQPPVPSF AATDAPVATQ AENGESPVAP DGPQA
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