| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23000 |
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| Symbol | |
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| ID | 8396189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2550531 |
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| End bp | 2551679 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987048 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_003144659 |
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| Protein GI | 257064987 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.202582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAACT ATTACGGAAC GCCTCAGGAC AATTCTCAGC CTCAGGCTCC GCAGCAACCC
CAGGCAACGC CGCAGCCTCA GCCGGCCCAG GCAGCGCCTC AGCCCCAGCA AACGGCATAC
AACCAGTACG CGCAGGCAAC CTATGCGCCC CAGCCCCAGG CTCCTTTCGC GCCGACGGCT
TCGGGTGCGG CGGCCGCGCC CCAGAAGAAG TCCCACACGG GCCTGATCGT CTTCGGCATC
GTCATGGCGG CCGTGGTCGC GCTGCTCATC GGCGCCATGG TGTCCTGCTC CCAGATGGTC
AACGAGTTCT CGTCCCTGGG CAGCTACGGA TACGGCGAAA CGACCACCTA CGGCGATACC
GTCGCGGTTA TCGACATCGA CGGCACCATC CAATACGACG GCACCACCAA CAGCCCCGAA
GGGTTGCGCG ATGTGCTGAC CCAGGCCGAA GAGGATGACA ACATCAAGGC CATCGTGCTG
CATGTGAACT CCGGCGGCGG CACGGCGACG GCGGGCGAAG AGATGTCCCT GCTCGTGGCC
GACTGCACCA AGCCCGTGGT CGTGTCCAGC GCTTCCATCA ACGCCAGCGC CGCGTACATG
ATCTCCAGCC AGTCCGACTA CATCTTCGTG AACCACACCA CGGCCATCGG CTCCATCGGC
ACGGTCATGC AGACCTATGA CGTGTCCGAA CTCATGGAGA AGCTGGGCGT GGACGTCATC
AACATCGCGT CGGCGGAGTC CAAGGATTCC AGCTACGGCA CGCGTCCTTT GACCGATGAG
GAAATCGCCT ACTATCAGGA CCTGGTCGAC AAGATCAACG CCCAGTTCAT CGGGCTTGTC
AGCGAAGGCC GCGGCATGGA TGTCTCCGAG GTCCAGGCTC TTGCCACCGG CATGGAGTTC
ACCGGTGACG ACGCCGTGGA CAACGGTCTG GCAGACGAAG TGGGCACCTA TGACGACGCC
CTAGCCAAGG CAGCCGAACT GGGCGGTATC GAAGGCGACG ACTACGATGT TGTGAACCTG
TACGTGAGCG GATACGGCGA CATGTCCGAC CTGCTGGGTC TCATGGGCTA TTCCTCCAAC
ACCAAGATTT CCGCTGAAGA CCTGATCGCA GCACTCGAGC TGCTGCAGTC CCAGGGAACC
ATTAAATAG
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| Protein sequence | MDNYYGTPQD NSQPQAPQQP QATPQPQPAQ AAPQPQQTAY NQYAQATYAP QPQAPFAPTA
SGAAAAPQKK SHTGLIVFGI VMAAVVALLI GAMVSCSQMV NEFSSLGSYG YGETTTYGDT
VAVIDIDGTI QYDGTTNSPE GLRDVLTQAE EDDNIKAIVL HVNSGGGTAT AGEEMSLLVA
DCTKPVVVSS ASINASAAYM ISSQSDYIFV NHTTAIGSIG TVMQTYDVSE LMEKLGVDVI
NIASAESKDS SYGTRPLTDE EIAYYQDLVD KINAQFIGLV SEGRGMDVSE VQALATGMEF
TGDDAVDNGL ADEVGTYDDA LAKAAELGGI EGDDYDVVNL YVSGYGDMSD LLGLMGYSSN
TKISAEDLIA ALELLQSQGT IK
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