Gene Shel_22540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22540 
Symbol 
ID8396143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2496869 
End bp2497759 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID644987002 
Productnegative regulator of beta-lactamase expression 
Protein accessionYP_003144613 
Protein GI257064941 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.517371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.554109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGC TCACCACACT GGCCATGCTG GCGGCGGCTT TCACGTTGAC GATGTCGCTT 
GCGGCCTGCG GCGCATCCGT CGACGCTTCG GACGCAGCCG ACGAAGGCGA CCGGCTCGAG
GTTTCCGACG AGGAGGTTCG CCACCCCGAA ACGCAAAAGG GGCCGTCGCT GGCCGAGAAC
ATGCTGGCGA ACCGTAGCGG GGAAAACCGC CGTTACCTGC AGCAGGTCCT GGAGGCCGCC
GACCGTCAGC TGGCGGCGCG GGGGCTGGCC TTTGCATCGG TCCTTTCCGC ATACGAGCCG
GTTGCGGTGT CTTCTGCCGA CGACCTGCGG GCGCAGCTGG ACATTACCGA GGATTACCGC
GACAGTTTCG TCCATGGCGA AAAGGGTGCG GAATACCAGA AGTACATCGT GCTGCACGAT
ACGGAAGGCG AGGGCTCTGC CGCGGGCGTC GTCGCCTATT GGGATGGAAA CGGCGCGGGC
GTGGCGGCCC ATTTCATCAT CAACAAAGAC GGAACCATCG TGCAGTGCGT GCCTCTGGAC
AAGATCACGC ACCACGCCGG CTTCGGCGAC ACGGGGCACA ATGAGCTGTA CGGCGTTCAG
GACGAATCCC GCGACGACAA GATGGGCACG GTGCCTATCG GCGACTGGGC CGCGGATTAC
GGCATGAACT CCTATTCCAT CGGCATCGAG ATGGTGCATG TGGGCGGTAG CGGCGATTAT
CCCGAGGCCC AGCTCGAGGC CCTGGACGGA CTGATCGCCT ACATCGACGC GTACTACGGA
TTTGAAAGCG CCATCATAGA CCACAAGGCG TGGCGGACGG GCAATTCCGA TACGTCTCCT
GAATTTGCGG GGTATCTCAG CAATTATCAG GACCATAGGA CGCATAATTA A
 
Protein sequence
MEMLTTLAML AAAFTLTMSL AACGASVDAS DAADEGDRLE VSDEEVRHPE TQKGPSLAEN 
MLANRSGENR RYLQQVLEAA DRQLAARGLA FASVLSAYEP VAVSSADDLR AQLDITEDYR
DSFVHGEKGA EYQKYIVLHD TEGEGSAAGV VAYWDGNGAG VAAHFIINKD GTIVQCVPLD
KITHHAGFGD TGHNELYGVQ DESRDDKMGT VPIGDWAADY GMNSYSIGIE MVHVGGSGDY
PEAQLEALDG LIAYIDAYYG FESAIIDHKA WRTGNSDTSP EFAGYLSNYQ DHRTHN