Gene Shel_22530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22530 
Symbol 
ID8396142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2495617 
End bp2496804 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID644987001 
Producthypothetical protein 
Protein accessionYP_003144612 
Protein GI257064940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.576293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTGTT TGAACTGCGG AGCTGAATTG AAGGACGGCG CAGGCTTCTG CACGTCTTGC 
GGCAAACCCG TGCAGCCGGT GGGTCCGGCT GCGAATGCGG CCCAAACCCA GATTATGGAC
AATGCGGCAT GGCGGCCTGA CACGACCGAG GTCATGCAGC CTGTCGACGG CGCGGGCGCG
GCGGGTTCGG GAAGTGCCCA TTACGTCGAG GCCCCGCAGC CCGTGCCTCC CAAAAAGACG
TCGAAGGGAT TGATCGCGGC GGTCGTCGTG GTGGCACTTG CGCTGGTGGG AATCCTGGCG
GCCCTGGTGT TCGGCGGAGT GCTCGGCGCC GACGATGCGG ATAAGGACGC CGACAAGCAG
GAGACCAAGG TGACCCAGAA GGCCGATGAG GTTAAGCCCG CCGAGGCGCT GGTGGGGAAC
TGGAACGCCA CCAAGCTGGT CAACTCCGAC GGATCGGACG AGATTCCGGA GGCCGGTACG
TACGTCATCA CGCTTGAAGA CGACGGCACA TGCAAGGCGA TGTTCGCCGG CACCGAGCAG
AAAGGCACCT GGGAGGTTGA CGAAGACGGC AAGGGCTCGG TAGAAGTGGA CGGCAAAGCG
GTTGATCTTG AGCTGGACGG CAAGAAGCTG ATCCTGTCTT CCGACGGGGA AGAAATCTGG
TTTAAGACCG CCACTGACGA GGATATGGAG GCCGCAGCGG CCATGGTCGG TTCGGCGGCC
GCATCGACCG CCAAAAGCGA CGACTCTTCG TCCGACACCG CCAAGAGCAC CGACGCAAGC
ACCGATGCGA ACAGCGCTGA TTCCAAGGAT GATGAAGTGA CCGCCACGGT GACCTCTGAC
GGAGGCTCCT CGAGCTCTTC CGACGGTTCC AGCAGCTCAT CCAGCAGTTC CAGCTCTTCG
TCTGGCTATG TTCTGCCGGA CAGCAGTACC CACTATTACA CCCAGTCCGA GCTGTCGGGC
TTAAGCGACT GGGAACTCTA CGTCGCCCGC AACGAGATCT ACGCCCGCCA TGGACGCGGA
TTCCAAAACG AGGACCTGCG GTCGTACTTC AACAGCCAGA GCTGGTACAC GGAGGTGTAT
TCGCCGTCCG AGTTCGACAG CATGGCCAGC CCGCTGAACG ACTGCGAGAA GGCCAACGCC
GAAACCATCA AGTCGGTTGA GCAGGCTCGC GGTTCCAGCT ACCTGTAG
 
Protein sequence
MYCLNCGAEL KDGAGFCTSC GKPVQPVGPA ANAAQTQIMD NAAWRPDTTE VMQPVDGAGA 
AGSGSAHYVE APQPVPPKKT SKGLIAAVVV VALALVGILA ALVFGGVLGA DDADKDADKQ
ETKVTQKADE VKPAEALVGN WNATKLVNSD GSDEIPEAGT YVITLEDDGT CKAMFAGTEQ
KGTWEVDEDG KGSVEVDGKA VDLELDGKKL ILSSDGEEIW FKTATDEDME AAAAMVGSAA
ASTAKSDDSS SDTAKSTDAS TDANSADSKD DEVTATVTSD GGSSSSSDGS SSSSSSSSSS
SGYVLPDSST HYYTQSELSG LSDWELYVAR NEIYARHGRG FQNEDLRSYF NSQSWYTEVY
SPSEFDSMAS PLNDCEKANA ETIKSVEQAR GSSYL