Gene Shel_22380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22380 
Symbol 
ID8396127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2481103 
End bp2482296 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID644986986 
Producthypothetical protein 
Protein accessionYP_003144597 
Protein GI257064925 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG5279] Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAT CCACGATGGG CGGATACGCC CCATGCAGCC CGACGCAGGG GAGGCTCACC 
ACCGTCCAGG CGTTCTCCCG CGCGAAATTC GATGCCCGAG CAGGGCTGAT GCGCTCGACG
CCAGGTGTGG AGAACCAGCC GCGCCGAGGG GTCGCGCACA CCGCGCGGTC GACCCAGGAT
GCAATCCGCT CGCTCATGCC GGCGCGCCAG TTCCGCTACG AATACGAACG GCTCAACCCG
GAGGAAAAAG GCGCATACCG CAGCCTTCTC GAAGGGTTTC TGGCCTTTAG GCCCGAGTTC
ACGGTAGAAG GCGCCGACCA TAGCCGCTTA AACGACATCC TGGTCATGAT GCGGCGCGAC
ATCCCCGAAA TGTTCTGGGT AAAGGAGTTC TCGATGCGCT ACTATGCCTC GAAGCCCAAG
CGCGTGACCG TGGTGCCCGC CTATAACATG ACCCAGGCGG AGCTTCTGCG GGTGCTGCGC
CGGATGGACG AGGTGGCGTG TCGTGTGCAA CGCGCGGTTT TCGGCATGCG TGATGTGCAG
AAAGCCCAGG TCATTCACGA CTTTATGGTG AACAACGTTA CCTATGATCT GGACATCGGC
TGGTCGGCGT ACCGCGCCTG CGGCCCGTTG GTGGGTGCCC GCGGCGGATG TGCGGCCATA
GCTATGGCCT ACAAGTACCT GGCGGACCAT TGCGGCCTGC GCTGCCAGGT GGTTTACGGC
GATGCGTCCG ATACGCCCGG CGATTACGAC AACATGGGCG GGCACGCCTG GAACATCATC
TGGGTGGACG GCGCACCTTA CCAGATGGAC GTCACCTTCG ATTTGACCTT GAGCAAGAAG
GGGCCTGTGC GCTACGACTA CTTCCTGCTG TCGGATGCGG AAATGGCCTT CGACCACGAG
TGGAGCCGGT CGCGCTACGC GCCCTGCAGC CATCCGAACA CGTTCTTCAA GAACCAAGGG
CGCTACGCCG AAAGCCGTCA GGAGCTGTTG CAGATGGTGA AGGACGCGGC GAAGAACGGC
TCGTACCTGC AGTTCAAGCT GGCCCCTCAC GCCTGCAGCG GCGATGAGTC CGAGTGGATC
TTCGACATTG CCTATGACGC CTTCCACCAG GTCAAACTGT ACAACATGAA GATGTCGCTG
TCGTCCCACG ACCCGTTGCA CGTGCATACC CTGCGTTGGA GCAAGGCCGC TTAA
 
Protein sequence
MAESTMGGYA PCSPTQGRLT TVQAFSRAKF DARAGLMRST PGVENQPRRG VAHTARSTQD 
AIRSLMPARQ FRYEYERLNP EEKGAYRSLL EGFLAFRPEF TVEGADHSRL NDILVMMRRD
IPEMFWVKEF SMRYYASKPK RVTVVPAYNM TQAELLRVLR RMDEVACRVQ RAVFGMRDVQ
KAQVIHDFMV NNVTYDLDIG WSAYRACGPL VGARGGCAAI AMAYKYLADH CGLRCQVVYG
DASDTPGDYD NMGGHAWNII WVDGAPYQMD VTFDLTLSKK GPVRYDYFLL SDAEMAFDHE
WSRSRYAPCS HPNTFFKNQG RYAESRQELL QMVKDAAKNG SYLQFKLAPH ACSGDESEWI
FDIAYDAFHQ VKLYNMKMSL SSHDPLHVHT LRWSKAA