Gene Shel_22330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22330 
Symbol 
ID8396122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2475064 
End bp2476032 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content58% 
IMG OID644986981 
Productprotein of unknown function (DUF1848) 
Protein accessionYP_003144592 
Protein GI257064920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000024887 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.601737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCA ACACTGGGGC CAGAACCGAT ACCGTGCAGT ATTACAGCGA ATGGCTGCTC 
AACCGTTTTG CGGAGGGGTA CGTGCTGTCC AGAAACCCTC TGTTTCCGGA AAAGGTCACC
CGCTACGAGC TCACACCGGA AGCCATCGAC CTGGTCATGT TCTGCTCGAA AAACTATGAA
CCCATCTTGC CGCGCCTACA CGAGATAACG GATCGGTTCA ACACGTATTT CCACTACACC
ATCACGGCCT ATGGCCGCGA CATCGAGCCG GGCGTCCCCT CCGTCGATGA CAGCATCCGC
ACCCTCCTCA AGTTGGAACG CCAGGTGGGA AGACAACGCA TCGTTTGGCG CTACGATCCA
GTGCTTCTGC TGGGGCCCTA CACCGTCGAG CGCCACCTGC AAACTTTCGA GCACCTCTGC
TCCCATTTGG CCGGGCACAT CGATCGCTGC GTTTTTTCGT TCGTAGGCAT GTACAAGAAG
CTGCAGCGCA ACATGCCGGA GCTCAAGCCG GTAAGCGCCG GCGACAAGCT TCTGCTGGCA
GAGCAGATGG GGCTCATCGC GCACAAGCAC GGCGTAGTGC TGCAAACCTG CGGCCAAGCC
GACGATTACA CGCGGTTCGG CATAGGGCCG TCGGCCTGCA CCAGGCTGGA TATCATGGGG
CCCGCCAATA ACGTTGAATT CCGCAACCTG AAGCACAAAG GCATGCGGGC GGGCTGCGGC
TGTTTCGAAA GCCGCGACAT TGGTGCCTAT AACACCTGCC CCAACGGGTG TCGGTACTGC
TACGCCAACT ACGACCACGC CCAGGCGGCA CGCAACTACC AAAACCACAA TCCGGCTTCG
CCCCTGCTCA TCGGCAACCT GTCGGATCAG GACGAAATCG TTCCAGGGTC TCAGAAAAGC
CTCTTGAAGA AAGAGTTCCG ACCAACCGCG CATGAACCAG GCACTCCTGT GCAGGAGTCC
CTGTTCTAG
 
Protein sequence
MILNTGARTD TVQYYSEWLL NRFAEGYVLS RNPLFPEKVT RYELTPEAID LVMFCSKNYE 
PILPRLHEIT DRFNTYFHYT ITAYGRDIEP GVPSVDDSIR TLLKLERQVG RQRIVWRYDP
VLLLGPYTVE RHLQTFEHLC SHLAGHIDRC VFSFVGMYKK LQRNMPELKP VSAGDKLLLA
EQMGLIAHKH GVVLQTCGQA DDYTRFGIGP SACTRLDIMG PANNVEFRNL KHKGMRAGCG
CFESRDIGAY NTCPNGCRYC YANYDHAQAA RNYQNHNPAS PLLIGNLSDQ DEIVPGSQKS
LLKKEFRPTA HEPGTPVQES LF