Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21970 |
Symbol | |
ID | 8396086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2437067 |
End bp | 2438269 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986945 |
Product | hypothetical protein |
Protein accession | YP_003144556 |
Protein GI | 257064884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000547844 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00670198 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATTGCC AGCAGTGCGG AAACCAGATT CCCGACAACG TGAGATTCTG CAACAATTGC GGTGCGCCGA CAGGCGCAGC TCAGACCCCC GGAATTTCCC AGGCACAGCA GATGGCTCCA GCCGCACCGA AGAAGTCCAA GGTGCCGATC GTCATAGCGG CCGTCGCAGC CGTGGCGCTC ATCGCGGGCA TCGGTGTTTT CGCTCTGACT CGCGGATCCG GCGCGGAGGT AGAGGAGGCG GCCATCAACA TCGCTGTTGA AGCCGACGGC CTTGATGGCG AAGGGTCGCC GGTGCCCGTG TGCGTCAAGG GCCGAACCGC CGAGGGCGAC AAGGTGGACC AAGAGCTGTT CGCTACGACC GACGAACCCG CTTCTGTCAA TTTGGAGCCA GGTGAATACA AGGTGAGCGT TCCGGCATCT CCGATCGCCG CAGGTGGCGA AATGTACGAC GTGCCCGATG ACGTGGCCGT GGTGTCTGTC GATAAGAAGG GTGGGATTTC CTACGATACC GAAGATGCCG ACGGCGAATC GGCCATTTCC GGCGTGGAAA ACGAAATGAA CGTCCGATTG ATAGAGGCTG ATCCCGACGG CGTGCGGGAT GACGAGCTCG ATGCGGCGTT GGAATGGGCC CAGAAAGCCG TTGACGAGGG GCTGCTTTCC GAAGGGCAGC TGGAAGACCT GAAGATGGCG GCGATGTATT GGACGCATCG CGCTGCAGAT TCGAAGCCTG CAGCCGAGGA GGCACCCGAG CCCGAAGCCG AAGAGAAAAC CGAGCCCGAA AAAACGGTTG AACCCGAGCC TGCCGAAAGC GGGTTGGACG ACGAAGCCAT GATCAAGGTG GCATCCGACT TCTGCTGGTC GTTCTTCAGC CAGTGGAGTC TGGACGAGTC CGGCACCATG ACAATCGTGG AGGGCGACCC CTGGATGGCC TACATCGAGC CCGGCTCCAA CGCATCGTGG GCGTTCGACT TCGAAGGTCC GCTGTACCTG GGCGCCGCGC CGAACGCCGA CAGCGTGGAG CTTACCACCG AGGGCCAACC CGACAACGTG GTCAAGGCGA CGGTGCGGTT CTGGGCAACG CAGTCGATGG TGAGTGCCGA CCAATGGGCC CAAATGCAGG CCGACGGACC CGACAACACC ATCACGGTGT ACCTGACCAT CGGCGAGAGC GGGCTGATAA CCGACATCGC GACCGAGTGG TAG
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Protein sequence | MYCQQCGNQI PDNVRFCNNC GAPTGAAQTP GISQAQQMAP AAPKKSKVPI VIAAVAAVAL IAGIGVFALT RGSGAEVEEA AINIAVEADG LDGEGSPVPV CVKGRTAEGD KVDQELFATT DEPASVNLEP GEYKVSVPAS PIAAGGEMYD VPDDVAVVSV DKKGGISYDT EDADGESAIS GVENEMNVRL IEADPDGVRD DELDAALEWA QKAVDEGLLS EGQLEDLKMA AMYWTHRAAD SKPAAEEAPE PEAEEKTEPE KTVEPEPAES GLDDEAMIKV ASDFCWSFFS QWSLDESGTM TIVEGDPWMA YIEPGSNASW AFDFEGPLYL GAAPNADSVE LTTEGQPDNV VKATVRFWAT QSMVSADQWA QMQADGPDNT ITVYLTIGES GLITDIATEW
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