Gene Shel_21970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21970 
Symbol 
ID8396086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2437067 
End bp2438269 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID644986945 
Producthypothetical protein 
Protein accessionYP_003144556 
Protein GI257064884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000547844 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00670198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATTGCC AGCAGTGCGG AAACCAGATT CCCGACAACG TGAGATTCTG CAACAATTGC 
GGTGCGCCGA CAGGCGCAGC TCAGACCCCC GGAATTTCCC AGGCACAGCA GATGGCTCCA
GCCGCACCGA AGAAGTCCAA GGTGCCGATC GTCATAGCGG CCGTCGCAGC CGTGGCGCTC
ATCGCGGGCA TCGGTGTTTT CGCTCTGACT CGCGGATCCG GCGCGGAGGT AGAGGAGGCG
GCCATCAACA TCGCTGTTGA AGCCGACGGC CTTGATGGCG AAGGGTCGCC GGTGCCCGTG
TGCGTCAAGG GCCGAACCGC CGAGGGCGAC AAGGTGGACC AAGAGCTGTT CGCTACGACC
GACGAACCCG CTTCTGTCAA TTTGGAGCCA GGTGAATACA AGGTGAGCGT TCCGGCATCT
CCGATCGCCG CAGGTGGCGA AATGTACGAC GTGCCCGATG ACGTGGCCGT GGTGTCTGTC
GATAAGAAGG GTGGGATTTC CTACGATACC GAAGATGCCG ACGGCGAATC GGCCATTTCC
GGCGTGGAAA ACGAAATGAA CGTCCGATTG ATAGAGGCTG ATCCCGACGG CGTGCGGGAT
GACGAGCTCG ATGCGGCGTT GGAATGGGCC CAGAAAGCCG TTGACGAGGG GCTGCTTTCC
GAAGGGCAGC TGGAAGACCT GAAGATGGCG GCGATGTATT GGACGCATCG CGCTGCAGAT
TCGAAGCCTG CAGCCGAGGA GGCACCCGAG CCCGAAGCCG AAGAGAAAAC CGAGCCCGAA
AAAACGGTTG AACCCGAGCC TGCCGAAAGC GGGTTGGACG ACGAAGCCAT GATCAAGGTG
GCATCCGACT TCTGCTGGTC GTTCTTCAGC CAGTGGAGTC TGGACGAGTC CGGCACCATG
ACAATCGTGG AGGGCGACCC CTGGATGGCC TACATCGAGC CCGGCTCCAA CGCATCGTGG
GCGTTCGACT TCGAAGGTCC GCTGTACCTG GGCGCCGCGC CGAACGCCGA CAGCGTGGAG
CTTACCACCG AGGGCCAACC CGACAACGTG GTCAAGGCGA CGGTGCGGTT CTGGGCAACG
CAGTCGATGG TGAGTGCCGA CCAATGGGCC CAAATGCAGG CCGACGGACC CGACAACACC
ATCACGGTGT ACCTGACCAT CGGCGAGAGC GGGCTGATAA CCGACATCGC GACCGAGTGG
TAG
 
Protein sequence
MYCQQCGNQI PDNVRFCNNC GAPTGAAQTP GISQAQQMAP AAPKKSKVPI VIAAVAAVAL 
IAGIGVFALT RGSGAEVEEA AINIAVEADG LDGEGSPVPV CVKGRTAEGD KVDQELFATT
DEPASVNLEP GEYKVSVPAS PIAAGGEMYD VPDDVAVVSV DKKGGISYDT EDADGESAIS
GVENEMNVRL IEADPDGVRD DELDAALEWA QKAVDEGLLS EGQLEDLKMA AMYWTHRAAD
SKPAAEEAPE PEAEEKTEPE KTVEPEPAES GLDDEAMIKV ASDFCWSFFS QWSLDESGTM
TIVEGDPWMA YIEPGSNASW AFDFEGPLYL GAAPNADSVE LTTEGQPDNV VKATVRFWAT
QSMVSADQWA QMQADGPDNT ITVYLTIGES GLITDIATEW