Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21740 |
Symbol | |
ID | 8396063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2406469 |
End bp | 2408364 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986922 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_003144533 |
Protein GI | 257064861 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000439315 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.410793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCA GAATCGACGC AGCGTTACAC AGGTTGGAAG ACTTGTTCGA CATCGGCGGC ATCAAAAAGG ACATTGTGCT TCTCGTCATT TCGGCGGTGG CGCTTGTTGC GAGTTTCGTG GCGGGAAGGT CGCTTCCCGT AGATCCGGCA TGGATCGCCA TCGTGCTCTG CGGTATCCCC ATTCTCGTCG GTGCCCTGGT CGGCCTTGTT ACCGAATTCG ACATCAAGGC CGATGTGTTG GTGGCCATAG CCCTTTGTGC TTCGGTTGCG GTCGGAGAAT ACTTCGCTGC AGGCGAGGTT GCGCTCATCA TGCAGCTGGG CGGCTTGCTG GAGGAGGTCA CGGCCGCCCG CGCTCGGGCA GGAATCAAGC GGCTCGTGTC GCTTACGCCC AGGTCCGCAC ATGTGATTGG AGCCGATGGC ACCGTTTCCG ATGTGCCCGC CGAGAAGGTC GCCGCAGGCG CCACGGTGCG CGTACTGCCC GGAGAAACGG TTCCGGTAGA CGGCCTGATC GTCACGGGCC TTACAAGCGT GGACGAAGCC ATCGTGACAG GAGAGCCCCT GCCGAAGGAC AAGGGCCCGG GTGACGAAGT GTCTGCCGGC ACGGTCAACT GCAACGGGTC GGTCGACGTG CGCGCCACCC GCGCAGGAGA CGACGGCACC ATCGCCCGCA TGGCACGCCT TGTGGAAAGC GCCGACGCAG GCAAAGCGAA GATCGTGCAC CTTGCTGACC AGTGGGCTAC CTGGGTTGTG GTCATCGCGC TGCTGGCCGC CGCCGGAACC TTCCTCGTTA CGCACGAGGT ACTGCGCGCA GTCACGGTGC TCGTCGTGTT CTGCCCTTGC GCGTTCGTGC TGGCCACACC CGCAGCCATC GCAGCCGGCA TCGGCAACGC CACGCGCCAT GGCTTCCTGG TGCGCGAGGG TGATGCGCTC GAGCGCCTGG CCAAAACCAA CCGCGTCGCC TTCGACAAGA CGGGCACGCT CACCGAAGGC ACGCCTGAAT TGTTCGCAAT CGAACCCCTT CCCGAATCGG GCTTCGACGA GCGGAGCCTC CTCGGGCTCG TCGCTTCCGC CGAAGCCAAG AGCGAACACC CGCTCGGCAA AGCCGTCGTG GATGCCGCCC GCAAAGCCGG TATCGAACCC GTCGCGTCGG ATGCGTTCGA GGCCCTGCCA GGACTCGGCA TCCGCGCACG CGTTGGAAAC TCATCCGTCG CAGTGGGCAA CAAAACCCTT ATGATCAAGG ACGGCATCTC TTTGAACAGG CAGGATTACC TGGTTGATAT GGCGGGACAA GGAGGCGGAT CAATCAGCTA CGTAGCCGTT GACGGCGCCC TTGCAGGGGC TGTGGTCCTC TCCGACACGG TGCGCACAGA CGCCGGCGAG GTTGTTGAGA ACCTGCGCTC CCAGGGCATC GAGCCCGTCA TGCTCACAGG CGACGCCCCC GAACCCGCCC GTGCTGTGGC TGCGCGACTT GGAATCGAAG AGATCTTCCC CCACTACCTG CCCGAGGACA AGCTCGCCGC AATCGAGCGC ATGGAATCAC AAGGCCGCAA GGTCGCCATG ATCGGCGACG GGGTGAACGA CGCCCCTGCG CTCAGGCGCG CCTATGTGGG CCTCGCTATT GGCGGCGTGG GATCCGACAT CGCTATGGAG GCTGCCGACA TCACCGTTGT TGGCGGCATT GCCGACCTTC CCCACCTGTT TGCGCTCTCC CGCAAGATGA TGCGCAAAAT AAAAGCGAAC CTCACGTTTT CGATGACCTT GAACTTCGTG GCCATCGCGC TGGCCATCGC AGCCGTGCTC GACCCCGTCA CCGGCGCACT TGTTCACAAT TGCGGCAGCG TATTCGTGGT TGTGAATTCG GCCCTCCTAT TGAGATGGGA ATCGCAGAAG GGCTAG
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Protein sequence | MKGRIDAALH RLEDLFDIGG IKKDIVLLVI SAVALVASFV AGRSLPVDPA WIAIVLCGIP ILVGALVGLV TEFDIKADVL VAIALCASVA VGEYFAAGEV ALIMQLGGLL EEVTAARARA GIKRLVSLTP RSAHVIGADG TVSDVPAEKV AAGATVRVLP GETVPVDGLI VTGLTSVDEA IVTGEPLPKD KGPGDEVSAG TVNCNGSVDV RATRAGDDGT IARMARLVES ADAGKAKIVH LADQWATWVV VIALLAAAGT FLVTHEVLRA VTVLVVFCPC AFVLATPAAI AAGIGNATRH GFLVREGDAL ERLAKTNRVA FDKTGTLTEG TPELFAIEPL PESGFDERSL LGLVASAEAK SEHPLGKAVV DAARKAGIEP VASDAFEALP GLGIRARVGN SSVAVGNKTL MIKDGISLNR QDYLVDMAGQ GGGSISYVAV DGALAGAVVL SDTVRTDAGE VVENLRSQGI EPVMLTGDAP EPARAVAARL GIEEIFPHYL PEDKLAAIER MESQGRKVAM IGDGVNDAPA LRRAYVGLAI GGVGSDIAME AADITVVGGI ADLPHLFALS RKMMRKIKAN LTFSMTLNFV AIALAIAAVL DPVTGALVHN CGSVFVVVNS ALLLRWESQK G
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