| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21620 |
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| Symbol | |
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| ID | 8396051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2397391 |
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| End bp | 2398233 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986910 |
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| Product | apurinic endonuclease APN1 |
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| Protein accession | YP_003144521 |
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| Protein GI | 257064849 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.483925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCATA TCGGTTGTCA TTTGTCGTCG TCTTCGGGCT TTTTGGCCAT GGGGAAGACG
GCCACCGAAA TCGGCGCGGA TACGTTTGCG TTCTTCACCC GCAACCCGCG GGGCGGAAGC
GCGAAGGCTA TCAATCCCGC CGACGCGCAA GCCCTTTGCG ACCACATGGC CCAACATGGG
TTCGCGCCGC TTGTAGCCCA TGCTCCGTAC ACGCTGAATC CCTGCTCGGA TAAGGAACGA
ACCCGCGAAT TTGCGCTTCA GGCCATGGCT GACGACCTGG TCCGCATGGA ATCCGTGCCG
AACAGCTACT ACAACTTCCA TCCGGGCAGC CATGTGGGGC AGGGGTCCGA AGCGGCCATC
GAGATGATCG CAGACCTGCT CAACCAGGTG CTGCGGCCGG AGCAGACCAC CACGGTGCTG
CTCGAGACCA TGTCCGGCAA AGGGAGCGAA GTGGGCCGCA CCTTCGAGGA GCTGGCGGCC
ATCATCGAGC GGGTGGAGCT CGAATCCCAC CTGGGGGTAT GCTTCGACAC CTGCCATGTG
TTCGACGGCG GGTACGACAT CGTGAACGAC CTTGACGGCG TGTTGGACGA ATTCGACCGC
GTCGTGGGGC TCGACCGGCT GCGGGCGGTG CACATCAACG ACAGCAAGAA CCCCTGCGGA
TCGCACAAGG ACCGCCACGA AACCATCGGC AACGGGCACA TCGGACTCGA GGCGTTTGCG
CGCATCGTCC GGCACCCGGC TCTGCGCGAC CTGCCGTTCA TTCTGGAAAC GCCGAACGAA
TTGCCCGGTT ACGCCGCCGA AATCGAAATG CTGCGCAGCC TGGCCGAAGG TGCGGAGGGC
TAG
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| Protein sequence | MLHIGCHLSS SSGFLAMGKT ATEIGADTFA FFTRNPRGGS AKAINPADAQ ALCDHMAQHG
FAPLVAHAPY TLNPCSDKER TREFALQAMA DDLVRMESVP NSYYNFHPGS HVGQGSEAAI
EMIADLLNQV LRPEQTTTVL LETMSGKGSE VGRTFEELAA IIERVELESH LGVCFDTCHV
FDGGYDIVND LDGVLDEFDR VVGLDRLRAV HINDSKNPCG SHKDRHETIG NGHIGLEAFA
RIVRHPALRD LPFILETPNE LPGYAAEIEM LRSLAEGAEG
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