| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21580 |
|---|
| Symbol | |
|---|
| ID | 8396047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2394316 |
|---|
| End bp | 2395257 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644986906 |
|---|
| Product | lysophospholipase |
|---|
| Protein accession | YP_003144517 |
|---|
| Protein GI | 257064845 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.768051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAT CCGACCTTAC GTATCCGAGC CACGACGGCA AAACCACCGT GCATGCCGTT
GTCTGGGAGC CCGACACCGA CGAGAAGCCC TTGCGCGGCG TCATCCAGAT CGCCCACGGC
ATGGAGGAAT ACATCGAAAG GTACACCGAG TTCGCAGGTT TTCTTGTCGA ACACGGTTTC
GCCGTCTGCG GAAACGACCA TGTGGGTCAT GGCAAAAGCG TGGCGACGCC GGAATCGCTG
AGTCACATCT CCTGTAACCC GAACGGAACC GACACGCTGA TCGAAGACGT CCATGGCCTG
CGCGGCCTTA TGCAGGAGCG CTTTGCAGGC GTGCCGTACG TCCTGTTCGG CCACTCGATG
GGGGCCTTCA TGACCCAGGC GTACCTGACG CGTCATGCCG ACGGGTTGGC AGCCGCCATC
ATCTGCGGCG TCGGTTTCAC GCCGCCTGTC GTGTCGAAGG GCGGCACCGC ACTGGTCAAC
CTCCTTATCA AGCTGCATGG CGAGACGGCT AAAAGCGAGC TGGTCGACGG CATGGTCACG
GGCGCATACT CCAAGGCCGT CAAGAACGCG CGCACGCCGT TGGACTGGCT TTCCTATAGC
GAAGCGAACG TGGACAAATA TATTGAGGAT CCGCTGTGCG GCGTCATGTT CACGCTGGGC
GGATACAAAG CTCTGCTTGG GTTGACGAGC ATCGCCGCCG ACCCGAAGGC TGCGGCCAAC
ATACCGAAGA CCTTGCCCGT TCTCTTTATC GCGGGCGCGG AGGACCCGGT GGGTGACAAC
GGCGAAGGCG TCATGAAGGC CGTCGAGCTG TATCAGAAAT CCGGCATCCA CGTGGTTGAC
GTGTCGCTGT ATCGCAGCAT GCGCCACGAG ATTCTGAACG AAGACGACCA CCAGCGCGTT
TTCGACGATG TCCTCACCTG GCTGACCAGG CGCGGCTTGT AA
|
|---|
| Protein sequence | MKTSDLTYPS HDGKTTVHAV VWEPDTDEKP LRGVIQIAHG MEEYIERYTE FAGFLVEHGF
AVCGNDHVGH GKSVATPESL SHISCNPNGT DTLIEDVHGL RGLMQERFAG VPYVLFGHSM
GAFMTQAYLT RHADGLAAAI ICGVGFTPPV VSKGGTALVN LLIKLHGETA KSELVDGMVT
GAYSKAVKNA RTPLDWLSYS EANVDKYIED PLCGVMFTLG GYKALLGLTS IAADPKAAAN
IPKTLPVLFI AGAEDPVGDN GEGVMKAVEL YQKSGIHVVD VSLYRSMRHE ILNEDDHQRV
FDDVLTWLTR RGL
|
|---|
| |