Gene Shel_21210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21210 
Symbol 
ID8396010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2351159 
End bp2353762 
Gene Length2604 bp 
Protein Length867 aa 
Translation table11 
GC content66% 
IMG OID644986870 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_003144481 
Protein GI257064809 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase
[TIGR01466] precorrin-3B C17-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATT TCGTAGGAGC GGGGCCCGGC GCCCCGGATT TGATCACGTT GCGCGCGGCC 
GACCTGCTGC GCGCGGCCGA TCAGGTGATT TATGCGGGCT CGTTGGTCAA TCCGGCGTTG
CTGGACCTGT GCGGCCCTCA GTGCGAAATC CACGATTCGG CCCATATGAC GCTGGAGGAG
GTCGTCGCAT GCATGCAGGC CTGCGAGGCC CGAGGCGGCA TGACGGTTCG CCTTCATACA
GGCGACACCA GCCTGTACAG TTCCATCCGC GAGCAGATGC GGCTGTTGGA CGATGCGGGA
ATCTCCTATG ACGTAGTGCC CGGCGTGTCC GCGTTCGGCG GCGCGGCGGC GGCCCTTCAG
ACCGAATACA CGCTGCCCAG CATATCGCAG TCGGCCATCA TCACCCGTAT GGAGGGGCGC
ACGCCCGTGC CTGACGGCGA GAAGCTGAGG CTTATGGCCC GCCACGGCTG CACGCTGGTG
CTGTTTTTGT CCACGAGCCT TTTGGAATCG GTGCACGACG AGCTGGTGGC AGGCGCCTAT
ACGGACGACA CCCCGGCGGC CATCGTGTAC AAGGCCACCT GGCCCGACGA GCGGGTGTTC
CGCTGCACGG TGGGCACTTT GGCCGAAACG GCGGCCGAAA ACGGCATCAA GAACACGGCG
CTCATCGTGG TGGGCGACGT GCTGGGCACA AGCTTCGACC GCTCGAGGCT TTACGACCCC
ACCTTCTCCC ATATGTTCCG CGAGGCCAGC CAGCCGGAAA AGACGCAGGA GACGCCTGCC
GACGACATGG ACGGCGGCGC TTCCGCAAGT CGGGCCCTTG CGTTGGCAGC GTTCACAAAA
CAAGGATGCG AACTGGGTAA ACGCATCGCA AGCGCATTGT CTGACGACGG ATGGAATGTG
CGGGTGTTCG CGCCTGAACG CTTGGCGAAA CAGGCGGAAT GCGCCTCGTA CGGCAATCTG
TCGGCGTGGA CGGGCCACCA TTGGCAGGAT ACGGCCATCG TGTTCGTGGG CGCGTCGGGC
ATCGCCGTGC GCTCTGTAGC GCCGTATGTG CAGGACAAGT TCAGCGACCC TGCGGTGGTG
AGCGTCGACG AGCGGGGAAC CTTCGCCGTG CCGCTGCTTT CGGGGCATGC GGGCGGCGCG
AACCAGCTGG CCCGCCGCAT TGCCTCCATT GTGGGAGGCA GGGCCGCCGT GTCGACGGCC
ACCGATGTGA ACGGGTTGTT CGCCGTTGAC GAATGGGCCT TCCAGCAGGG CCTTTGCATT
GTCGAGCGGG ATGCGGCCAA GGCCGTGTCG GCGGCGCTTC TTGAAGGGGA GCCTGTCGGG
TTCTCGAGCG ACGTGCCTTG CGAAGGCGAT CTTCCGACGG GTGTGACGGC TGCAGGCGCC
GGGGATGCGA AACCTTCCGT CGGCTTCGTG ATTACCCATG ACGTGGACGC GAACCCCTTC
GAAACCACGC TGCACCTGAT GCCCCGCGAT GTGATTGTGG GCATAGGCTG CAGGCGCGGC
ACCTCGGCTG CTGCTGTCGA GCAGGCCGTC TGCCAGGCGT TGGACTGCGC CGGCATCGAC
ATGCGTCGCG TGGCCGGGCT GGCAACCATC GATCTGAAGG CCGATGAGCA GGGCTTGTTG
GAAGTCGTCC GCGCCCATGA CTGGCCTTTG CAGACGTTCT CGGCTCAGGA GCTGGAGAAG
GTGCCGGGCG CGTTCTCCGA TTCCGAATTT GTGAAGGAAA CCACCGGTGT GGGCAACGTG
TGCGAGCGCG CCGCGGTGGC TGCGGGCGGC GCGTTGCTGA CGTCCAAGCA GGCGCAAGAT
GGCGTGACCG TCGCGCTGGC CGTCCGTCCG GTCGTCCCGT CGTTCGCCCG AAAGGGCGCC
GGCAAGCTTG CCGTGGTAGG CATCGGGCCG GGGGCGGGCC AGGACATGAC GGGGCGGGCC
CGTGCGGCCA TCTCGGCCAG CGACATCATC GTGGGCTACA CGGTGTACGC CGGCCTGCTG
GCCGAGGAGT TTCCGGACAA GCCGATGTTC ACCACTCCCA TGCGCAAAGA GGTCGAGCGC
TGCGAACGAG CGCTTGAGCT GGCCAGACAG GGCAAGAACG TGGCCATGGT CTGCTCGGGG
GACGCGGGCG TCTACGGCAT GGCCGGCCTG TGCTTCGAGC TGGCCGAAAA AGCCGGTGAG
GTGGTGGACA TCGACGTTGT CCCCGGCATC ACGGCGGCCA CGGGCGGCGC GGCGGTGCTG
GGTGCTCCGC TCATGCACGA TTTTGCGGTC ATCTCGCTAT CCGACCTGAT GACGTCGTGG
GAAACCATCG AAGCCCGCCT GCGGGCGGCC GCGTCGTCGG ACATGGTGGT GTGCCTGTAC
AACCCCTCGT CCCACAAGCG GCCCGACTAC CTGCAGCGGG CCTGCGACGT CCTGCTTGCG
GCGGGCGCTT CGCCCGAAAC CGTCTGCGGG TATGTGCGCA ACATCGGCCG CGACGGGGAG
GAGGCCTGCA CGTGCACCCT GTCTGAACTG CGGGAAACCG CCGTCGACAT GTTCACCACG
GTGTTCGTCG GCAACAGCCA GACGAAGCGC ATCGGCGGTG CCATGGTGAC GCCTCGCGGC
TATCTGCAAA GGGGGGACGA ATGA
 
Protein sequence
MIHFVGAGPG APDLITLRAA DLLRAADQVI YAGSLVNPAL LDLCGPQCEI HDSAHMTLEE 
VVACMQACEA RGGMTVRLHT GDTSLYSSIR EQMRLLDDAG ISYDVVPGVS AFGGAAAALQ
TEYTLPSISQ SAIITRMEGR TPVPDGEKLR LMARHGCTLV LFLSTSLLES VHDELVAGAY
TDDTPAAIVY KATWPDERVF RCTVGTLAET AAENGIKNTA LIVVGDVLGT SFDRSRLYDP
TFSHMFREAS QPEKTQETPA DDMDGGASAS RALALAAFTK QGCELGKRIA SALSDDGWNV
RVFAPERLAK QAECASYGNL SAWTGHHWQD TAIVFVGASG IAVRSVAPYV QDKFSDPAVV
SVDERGTFAV PLLSGHAGGA NQLARRIASI VGGRAAVSTA TDVNGLFAVD EWAFQQGLCI
VERDAAKAVS AALLEGEPVG FSSDVPCEGD LPTGVTAAGA GDAKPSVGFV ITHDVDANPF
ETTLHLMPRD VIVGIGCRRG TSAAAVEQAV CQALDCAGID MRRVAGLATI DLKADEQGLL
EVVRAHDWPL QTFSAQELEK VPGAFSDSEF VKETTGVGNV CERAAVAAGG ALLTSKQAQD
GVTVALAVRP VVPSFARKGA GKLAVVGIGP GAGQDMTGRA RAAISASDII VGYTVYAGLL
AEEFPDKPMF TTPMRKEVER CERALELARQ GKNVAMVCSG DAGVYGMAGL CFELAEKAGE
VVDIDVVPGI TAATGGAAVL GAPLMHDFAV ISLSDLMTSW ETIEARLRAA ASSDMVVCLY
NPSSHKRPDY LQRACDVLLA AGASPETVCG YVRNIGRDGE EACTCTLSEL RETAVDMFTT
VFVGNSQTKR IGGAMVTPRG YLQRGDE