Gene Shel_21180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21180 
Symbol 
ID8396007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2347611 
End bp2349011 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content66% 
IMG OID644986867 
Producthydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase 
Protein accessionYP_003144478 
Protein GI257064806 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCT CCATACCGCG CATCGTCATA GGCGCCGCGT CCAGCGGCTC CGGCAAAACC 
ACGGTCGCCT GCGCGCTCAT GCGGGCGTTG GTGCGCCGGG GTTTGGACGT GCGTGCCGGA
AAATGCGGCC CCGACTACAT CGACCCCATG TACCACACCC GGGTGGTGGG GGCGCCCTCC
CGCAACCTGG ATTTGTTCCT GGCCGGCAAG AACACGGCGA AGGCCCTGTT CGCAGAGGCG
AACGAAGGTG CCGACATCGC CGTGGTGGAA GGCGTCATGG GCTACTACGA CGGCGTTGCC
CTGAGCAGCG ACGCTTCGGC GTGGGACGTG GCGTGCACGC TTGAGGCTCC GGCCCTGCTG
GTGGTGGACG GACGCAGCCG AGCCCGGTCC ATCGCGGCGG AGGTGCAGGG CTTCGTGAAT
TTCCGCACCC CCAGCATGGT GGCCGGCATC ATCTTGAACC GCACGTCGGA GGCGATGTAT
GTTCGGTTGA AGCAGGTCAT CGAGGAGGAA TGCGGCGTTG CCGTTTTCGG GTACCTTCCC
GACGTGGAGA ACGCGTCGCT TGAGAGCCGG CATCTAGGAT TGGTGCTGGC AGACGAGGTG
TCCGATTTGC AGCGCAAGCT GGACGGCCTG GCGGATGCGG TTGAGGCCTG CATCGATTTG
GATGCGGTGC TGAGGCTGGC CGCGTCGGCG CAGCCGCTTG CCTTCGAACC GATGGGGCTT
CCTGCTAAGG CGGATGGCAA CCCGACCATC GCCGTGGCCT ATGACGAGGC CTTCTGCTTC
TATTACGAAG ACGCCCTGCG CCTGCTGGAG AAACTGGGCG CGCGCCTGGT GAGGTTCTCG
CCGCTGCGCG ATGCGCAGCT TCCGGCCTGC GACGGCCTGT ATCTGGGCGG CGGCTATCCG
GAGCTGCATG CCAAGATCCT TTCCGAAAAC ACGGGGATGC TCGAGTCGAT CCGGCGGGCC
GTGGCAGCGG GCATGCCTAC GGTGGCCGAG TGCGGAGGCT TTCTGTACCT GCAGCAGCAG
CTGGAGGATG CCGAAGGCGA AGCCTGGCCG ATGGTCGGCG CGCTCGACGG GCGCGGGTTC
AAAACGGGGC GCCTGCAGCG GTTTGGATAC GTGACGCTTT CGGCCCGACG GGACGGGCTT
CTGGCCTGCG AGGGCGATAC GCTTCCGGCA CATGAGTTCC ATTACTGGGA TTGCGACGCA
TGCGGGGACG CCTTCGCCGC GCGCAAGCCC CAGTCCGCCC GCCATTGGGA CTGTTGCATG
TGCACGCCGA CCCTCCATGC GGGCTTTCCG CACCTGTATC TTCCCGGCGC GCCTTCAGCC
GCCGCCCGAT TCGTCCGCGC CTGTGCCGAA TGGGACAAAG GGGACAGTCC CTTTTGTCCC
ACCGAGGACG GCGATGCCTG A
 
Protein sequence
MIASIPRIVI GAASSGSGKT TVACALMRAL VRRGLDVRAG KCGPDYIDPM YHTRVVGAPS 
RNLDLFLAGK NTAKALFAEA NEGADIAVVE GVMGYYDGVA LSSDASAWDV ACTLEAPALL
VVDGRSRARS IAAEVQGFVN FRTPSMVAGI ILNRTSEAMY VRLKQVIEEE CGVAVFGYLP
DVENASLESR HLGLVLADEV SDLQRKLDGL ADAVEACIDL DAVLRLAASA QPLAFEPMGL
PAKADGNPTI AVAYDEAFCF YYEDALRLLE KLGARLVRFS PLRDAQLPAC DGLYLGGGYP
ELHAKILSEN TGMLESIRRA VAAGMPTVAE CGGFLYLQQQ LEDAEGEAWP MVGALDGRGF
KTGRLQRFGY VTLSARRDGL LACEGDTLPA HEFHYWDCDA CGDAFAARKP QSARHWDCCM
CTPTLHAGFP HLYLPGAPSA AARFVRACAE WDKGDSPFCP TEDGDA