Gene Shel_20780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20780 
Symbol 
ID8395967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2308443 
End bp2308901 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content59% 
IMG OID644986827 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003144438 
Protein GI257064766 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA CGAATACAGC GGACTTCGAC CCGTTGAAGC TAGACAATCA GCTCTGTTTC 
CCCTTGTACG CCTGCGCGAA GGAGGTCGTG CGTCGCTACA CGCCGTTCCT CAACGAGATC
GACCTCACGT ACACGCAGTA CATCACCATG ATGGTCATGT GGGAATGCAA ATCGCTTTCC
GTCCGCGAGC TGGGCGAGAA GCTGCTGCTT GATTCCGGCA CCCTGACGCC GCTGCTGAAA
AAGCTGGAGG CGAAGGGTCT GGTCATTCGC GAACGTTCCC ATGAGGACGA ACGCAAGCTC
AACGTGGTCA TCACCGAGAA GGGGGAGGCG TTGCGAAGCC GTGCGCTCGG CATCCCCCGG
CAGATGGGCA AGTGCGTGGA CCTGTCCGCG GAAGACGCCG CGGAGCTGCG CCGCCTTCTG
AACAAGCTTA TCGACAACGT TAGGCAGGAG GAGAGGTAG
 
Protein sequence
MENTNTADFD PLKLDNQLCF PLYACAKEVV RRYTPFLNEI DLTYTQYITM MVMWECKSLS 
VRELGEKLLL DSGTLTPLLK KLEAKGLVIR ERSHEDERKL NVVITEKGEA LRSRALGIPR
QMGKCVDLSA EDAAELRRLL NKLIDNVRQE ER