Gene Shel_20200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20200 
Symbol 
ID8395909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2252133 
End bp2252627 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content50% 
IMG OID644986771 
Producthypothetical protein 
Protein accessionYP_003144383 
Protein GI257064711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.100655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTCG AGAAGTGCCA AGACCTCAAC GAACTCAAAA GCGTCTATAA AAAGTTGGCG 
CTAAAGCATC ATCCAGATTG CGGTGGCGAT GTTCGCATCA TGCAAGAAAT CAATGCGGAA
TATGACCGCA TCTTTTTGTT GCTGAAAGCG AAACAAAACT TCGCCGCGAA CGATGATTTG
ACAGGTCGAA CCAGACACAC AACAGAAACG CCCGACGAAT TCAAAGCGAT AGTCGATGTG
CTTCTGAAAT TGGAGGGTGT CGAAGTCGAA CTCTGCGGCG CATGGCTCTG GATTGACGGA
AACACCTACC CACATCGCTC AGCGCTCAAA GCGGCTGGTT GCCGCTGGTC TGCGTCAAAA
CGTAAATGGT ACTGGCGGCA TGAGGAAGAC GATTGTTTCT GGTCACGCGG AACAGCGTCG
ATGGAAGAAA TCCGCGACAA ATACGGTTCA GAGTGGCTTA GACCAAAAGC CGAACACGTC
ACACTACCCG CTTAA
 
Protein sequence
MYFEKCQDLN ELKSVYKKLA LKHHPDCGGD VRIMQEINAE YDRIFLLLKA KQNFAANDDL 
TGRTRHTTET PDEFKAIVDV LLKLEGVEVE LCGAWLWIDG NTYPHRSALK AAGCRWSASK
RKWYWRHEED DCFWSRGTAS MEEIRDKYGS EWLRPKAEHV TLPA