| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19560 |
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| Symbol | |
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| ID | 8395845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2190612 |
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| End bp | 2191703 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986707 |
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| Product | uroporphyrinogen-III decarboxylase |
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| Protein accession | YP_003144320 |
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| Protein GI | 257064648 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000289502 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGAGC TCATCCAGAT GGAAATGACG CCGAAAGAGC GCCTGGCGGC GTATGCCCGC
GGCGAAGAGG TGGACCGCAT TCCAACGACA TTGAGCGCGG GGGAGACCGG TTGTTTGCAT
CTGTTGGGCA TACCCATCTG CGACTACTAT TTCTCGGCCG ATATCATGGT GCGGATCGAG
TCGTTTTTGG CCGACAGTAC AGGTGCGGAT AACCTTGGCA TGGGCCTGGG GCTTCGTACG
GTGCCGGAGG CGCTCGGCTG CAAGCTGGCA TATCCTGAAA CCAGCGTTTC GTATGTGGAA
GAGCCGGCTC TTAAGTCTTT GGACGAGGTA GAGGGGCGGC CCCACGTCGA CGTGCGCAAG
GACGGTCGGC TTCCCATTAT TATCGAGGCG TTCCAGCGCC TGCAAGACAA GTACGGCGAT
GTGCGTACCA TGGGAAGCGG CCTGGCCGGT CCCTTCACTA CGGCGGCAAC GCTTTACGGC
GTGGAGCGGT TCCTGAAGGC CACCCGCAAA GACCCGGAAG GCGTGCATCG TCTGATGCAG
TACGCCACCG ACTGCGTGGT GGAATGCTGC CGCGATTTGC ATGAGATTCT CGGCATCGGA
TTCTCGCTTT CGGAACCCGT GGCGTCCAAA GACTTGGTGT CGAAACGGCA GTTCAACGAG
TTTTTCGTGC CTTACCTGCG CCAATGCGTC GAACGTATGA GCGAATTCCA GAACGTGCCC
TCGCTGCATA TCTGTGGGCA TACGAACGAC CGCTGGAGCG AGGTTGTGGA ATGCGGCATC
AGCGGTTTCT GGGTAGACAA CTGCGAAAGC CTGTGCGACC TGAAGAACGC CCACGGAAGC
AGTATCGGCA TTTCCGGCAA CGTTGCGCCG GTTGATGTCC TTCGCAACGG AACGCAGGAG
GCTATCGCCG CATCAGTTCG CGATTGCATC GAGCAGGCGG CAGACAACCC GCGGGGTTTC
ACCCTGTGCC CGGGTTGCAC GACGCCTGTG GGAACCTCTT TGGATAACAT GATTGCGTTC
ATGAATGCTG CGGCAACCTA TGGGCGGGGT GCACGAAAGG GGTGCATGCC GCAAGGATTG
CAAAGCGCAT GA
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| Protein sequence | MLELIQMEMT PKERLAAYAR GEEVDRIPTT LSAGETGCLH LLGIPICDYY FSADIMVRIE
SFLADSTGAD NLGMGLGLRT VPEALGCKLA YPETSVSYVE EPALKSLDEV EGRPHVDVRK
DGRLPIIIEA FQRLQDKYGD VRTMGSGLAG PFTTAATLYG VERFLKATRK DPEGVHRLMQ
YATDCVVECC RDLHEILGIG FSLSEPVASK DLVSKRQFNE FFVPYLRQCV ERMSEFQNVP
SLHICGHTND RWSEVVECGI SGFWVDNCES LCDLKNAHGS SIGISGNVAP VDVLRNGTQE
AIAASVRDCI EQAADNPRGF TLCPGCTTPV GTSLDNMIAF MNAAATYGRG ARKGCMPQGL
QSA
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