| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19540 |
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| Symbol | |
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| ID | 8395843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2188446 |
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| End bp | 2189105 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986705 |
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| Product | predicted cobalamin binding protein |
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| Protein accession | YP_003144318 |
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| Protein GI | 257064646 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.109769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000629767 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTGGCCG CAAGCAAAGA AGAGCTGATT CAGAAAATGT ACGACTGCGT CGTCGAGATG
GAGGACGAAG AGGTCGTCGA TGTGTGCAAC GAATACCTGG AAGCCGGCTA CGATGCCTAC
GATGGCATCA TGGAAGGCCT GGTCGCAGGT ATGAACAGGG CTAGTGAGCT GTACGACGAG
GAGGAATACT TCGTTACCGA CGTGCTGCTG TGCTCGGACG CGCTGTATGC GGGCCTCGAC
GTCCTGCGTC CGCACCTGAA GTCTGAAGAG GCTGACGGTC AGCGCAAGAA GGTGGTCATC
GGCGTGGTCG AAGGCGACAC ACATGACATC GGCAAGAACC TGGTCAAGAT CATGCTGGAA
ACCGCTGGCT TCGAAATCTA CGACCTGGGC CGCGACGTTC CGCTGGACGA TTTCGTCACC
AAGGCCAAGG AGGTCGACGC CGACATTATT GCCATGTCCA CCCTCATGAC GACCACCATG
GGCGGCATGG GTGAGGTCGT GAAGAAACTG GAAGAGGCCG GCATCCGCGA CAAGGTGAAG
GTCATGGTCG GCGGAAGCCC CGTTTCCCGC AGGTTCGCAG ACGAAATCGG TGCGGAAGGA
TACTCCCGCA ACGCCGTCGA GGCCGTCAAG ATGGCCAAGG AACTGGTCGG CATGGCCTAG
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| Protein sequence | MVAASKEELI QKMYDCVVEM EDEEVVDVCN EYLEAGYDAY DGIMEGLVAG MNRASELYDE
EEYFVTDVLL CSDALYAGLD VLRPHLKSEE ADGQRKKVVI GVVEGDTHDI GKNLVKIMLE
TAGFEIYDLG RDVPLDDFVT KAKEVDADII AMSTLMTTTM GGMGEVVKKL EEAGIRDKVK
VMVGGSPVSR RFADEIGAEG YSRNAVEAVK MAKELVGMA
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