| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19490 |
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| Symbol | |
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| ID | 8395838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2184152 |
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| End bp | 2185651 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986700 |
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| Product | lysyl-tRNA synthetase (class II) |
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| Protein accession | YP_003144314 |
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| Protein GI | 257064642 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00347128 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000087404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGAAG AAAACATCCA GCCCGAAGCA ATCGAGGACG ATCCCATCGA GGTTCGCCTC
AACAAGCGTC AGGCGCTTAT CGACGCAGGG AAGAACCCCT ACGGTTCTCG CTTTGACTAC
ACGCATCACG TGGCCGAACT GGAAGAGAAG TACGCAGATC TGGAAGACGG GGCAGTCACC
GAAGACGTGG TAAAGGTGGC CGGCCGCATC ATGGCCATCC GCAATCAGGG CAAGATTGCC
TTCGTCGTCG TGCGTGACGC CACGGCAGAC ATCCAGCTGT TCTGCCGCAT CAACGTGTTG
GGCGAAGAGG CCTACGAAGA GGTCAAGAAC CTCGATGTGG GCGATTGGGT CGGTGCCGAA
GGCACCGTCA TCCGCACGCG TCGCGGCCAG CTATCTGTGT CGCCTACCGA GGTGCGTCTG
CTCTCCAAGA GCATCCGTCC GCTGCCTGAG AAATTCCACG GCCTGGCGGA TAAGGAAACC
CGCTACCGCC AGCGTTATGT CGACCTGGTC ATGAACCCCG ACGTGCGCGA GACCTTCGAG
AAGCGCTTCA AGATTCTGGC GGCCATTCGC CGTTATATGG AAGGCCAGGG CTTCTATGCT
GTGGAAACCC CCATGCTGCA TTCCATCATG GGCGGTGCCA ACGCCAAGCC CTTCGTGACC
CACCACAACG CCCTTGACAT CGACTTCTAC CTGCGCATCG CCACGGAGCT TCCGCTGAAG
CGCCTGCTGG TGGGCGGTTT CGAGCGCGTC TACGAGATGG GCCGCATCTT CCGCAACGAA
GGCATGGACC CGTACCACAA CCCCGAGTTC ACCACCATCG AGGCGTATCA GGCCTATTCC
GACCTGGACG GCATGAAAGA GCTTACCCAA GGCATGATTC AGTTTGCCGC GCAGGAGGCA
TGCGGTACGC TGCAGATCGA ATACCAGGGT CAGGCTGTCG ACCTCTCCGG TGAATGGGAG
AGCCGCACCA TGTGTGACCT GGCCACCGAA TATGCCGGGG AGGAAGTCAG CTTCGATCGC
ACCCGTGAGG AGCTGGCCGC CATCGCTGAA CGCGGCGGGG CCCATGTGGA AGACGCCTGG
GGCAAGGGCA AGATCATTTC CGAGATCTTC GAAGCCTACG TCGAGGACCA TCTGATCCAG
CCCATCTTCG TCACAGAGCA TCCGCTGGAA ATCTCCCCGT TGGCCAGCAA GCTGCCTGAC
AACCCCGAGC TGACCGCCCG CTTCGAGCTG TTCATCTGCG GACATGAGTA CGCCAATGCG
TTCACCGAGC TCAACGACCC GGTGGACCAG CGCGAACGTT TCGCCGCCCA GATGCAGGCC
AAGGTCCAGG GTGACGAGGA GGCCATGGGC TACGACGAGG ACTACATCCG AGCGCTTGAA
TACGGCATGC CGCCGGCAGG CGGCGTGGGA TTGGGCATTG ACCGATTGGT CATGTTGCTC
ACGGATTCCG CGACCATCCG CGACGTCCTG TTGTTCCCGC ATATGCGCCC CGAGGCATAG
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| Protein sequence | MTEENIQPEA IEDDPIEVRL NKRQALIDAG KNPYGSRFDY THHVAELEEK YADLEDGAVT
EDVVKVAGRI MAIRNQGKIA FVVVRDATAD IQLFCRINVL GEEAYEEVKN LDVGDWVGAE
GTVIRTRRGQ LSVSPTEVRL LSKSIRPLPE KFHGLADKET RYRQRYVDLV MNPDVRETFE
KRFKILAAIR RYMEGQGFYA VETPMLHSIM GGANAKPFVT HHNALDIDFY LRIATELPLK
RLLVGGFERV YEMGRIFRNE GMDPYHNPEF TTIEAYQAYS DLDGMKELTQ GMIQFAAQEA
CGTLQIEYQG QAVDLSGEWE SRTMCDLATE YAGEEVSFDR TREELAAIAE RGGAHVEDAW
GKGKIISEIF EAYVEDHLIQ PIFVTEHPLE ISPLASKLPD NPELTARFEL FICGHEYANA
FTELNDPVDQ RERFAAQMQA KVQGDEEAMG YDEDYIRALE YGMPPAGGVG LGIDRLVMLL
TDSATIRDVL LFPHMRPEA
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