Gene Shel_19290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19290 
Symbol 
ID8395818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2163345 
End bp2164166 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID644986680 
Producthypothetical protein 
Protein accessionYP_003144294 
Protein GI257064622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00367392 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGCTA TGAATGATCG TCTTATCGAT ATTCAGTTCA ATGAAAGCGA GCTTCGGGAG 
GAGTTCTTCC GTCTGCGCGG ACGTCTGCTT GATGTCATCG TCGAGTTCGA CACCATCGAC
CTACGGTTGA ACCCCGAGAC CGAGGCGCGT TATTCCGCCC TTATCGGCGT ATGGGAGCGT
GGGCTTGCCA AGTGCGAAAT CGACCTGCGC CGTGCCAAAC GGAAATACCA GTTGGCGAAA
TGCGCCGCCC ATCATGGGTA TCAGGTTACG GAAGAGTCGT TGGACATGCA GATCGATGCG
GAGCTTGGCG ATTCTTCGCG ATTTTTGGCT TGCGCCGCAT CCCGCAACCT CAACGCTATG
GACGCATGCC TGAACGCCGA ACGTTACACC GAGGACATGT TGGAACGGCT CAGAGCCATG
TTCCGTCATA TCGTCGACGA GCTGCATCCG GATTTGAATC CGGACGTCGG TCTGCTGGAA
GGGCAGCTGC TCGATGAGGC CAGAGTTGCC TACGCCCGAG GGGACATGGC CGACCTCTGC
CACATTGACC GCAGCATCCA CCGTGGCGGC GGTGTTCGAG CATACATCGA TTCGCTTTCC
ATCGACGAGC TGACCATCGA GCACGAACTG CTGCATGCCT GTTTTGTGGT TCGGTCTGAA
AACCTCGCCC ATATGCGCAA ATCCTTCCCA TATATCTATC ACGACTTGGT GCGAGATCCC
AACTGGGTAT GCACGAAGGC CAATACGTTG CGAAACCAGA TAAAAGCCGT CCAGGCGCAG
ACGAAAGAGT ACAAACGCCT GTATCAGGAG CTGAGGGGGT AA
 
Protein sequence
MDAMNDRLID IQFNESELRE EFFRLRGRLL DVIVEFDTID LRLNPETEAR YSALIGVWER 
GLAKCEIDLR RAKRKYQLAK CAAHHGYQVT EESLDMQIDA ELGDSSRFLA CAASRNLNAM
DACLNAERYT EDMLERLRAM FRHIVDELHP DLNPDVGLLE GQLLDEARVA YARGDMADLC
HIDRSIHRGG GVRAYIDSLS IDELTIEHEL LHACFVVRSE NLAHMRKSFP YIYHDLVRDP
NWVCTKANTL RNQIKAVQAQ TKEYKRLYQE LRG