Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19290 |
Symbol | |
ID | 8395818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2163345 |
End bp | 2164166 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644986680 |
Product | hypothetical protein |
Protein accession | YP_003144294 |
Protein GI | 257064622 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00367392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATGCTA TGAATGATCG TCTTATCGAT ATTCAGTTCA ATGAAAGCGA GCTTCGGGAG GAGTTCTTCC GTCTGCGCGG ACGTCTGCTT GATGTCATCG TCGAGTTCGA CACCATCGAC CTACGGTTGA ACCCCGAGAC CGAGGCGCGT TATTCCGCCC TTATCGGCGT ATGGGAGCGT GGGCTTGCCA AGTGCGAAAT CGACCTGCGC CGTGCCAAAC GGAAATACCA GTTGGCGAAA TGCGCCGCCC ATCATGGGTA TCAGGTTACG GAAGAGTCGT TGGACATGCA GATCGATGCG GAGCTTGGCG ATTCTTCGCG ATTTTTGGCT TGCGCCGCAT CCCGCAACCT CAACGCTATG GACGCATGCC TGAACGCCGA ACGTTACACC GAGGACATGT TGGAACGGCT CAGAGCCATG TTCCGTCATA TCGTCGACGA GCTGCATCCG GATTTGAATC CGGACGTCGG TCTGCTGGAA GGGCAGCTGC TCGATGAGGC CAGAGTTGCC TACGCCCGAG GGGACATGGC CGACCTCTGC CACATTGACC GCAGCATCCA CCGTGGCGGC GGTGTTCGAG CATACATCGA TTCGCTTTCC ATCGACGAGC TGACCATCGA GCACGAACTG CTGCATGCCT GTTTTGTGGT TCGGTCTGAA AACCTCGCCC ATATGCGCAA ATCCTTCCCA TATATCTATC ACGACTTGGT GCGAGATCCC AACTGGGTAT GCACGAAGGC CAATACGTTG CGAAACCAGA TAAAAGCCGT CCAGGCGCAG ACGAAAGAGT ACAAACGCCT GTATCAGGAG CTGAGGGGGT AA
|
Protein sequence | MDAMNDRLID IQFNESELRE EFFRLRGRLL DVIVEFDTID LRLNPETEAR YSALIGVWER GLAKCEIDLR RAKRKYQLAK CAAHHGYQVT EESLDMQIDA ELGDSSRFLA CAASRNLNAM DACLNAERYT EDMLERLRAM FRHIVDELHP DLNPDVGLLE GQLLDEARVA YARGDMADLC HIDRSIHRGG GVRAYIDSLS IDELTIEHEL LHACFVVRSE NLAHMRKSFP YIYHDLVRDP NWVCTKANTL RNQIKAVQAQ TKEYKRLYQE LRG
|
| |