Gene Shel_18810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18810 
Symbol 
ID8395770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2111512 
End bp2112387 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID644986632 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003144246 
Protein GI257064574 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.222917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA AGCTAGACCG GCTGACCAAG CAGTTCGGGG CGCGCATTGC CGTGGACCGC 
GTGTCGGCGA CGCTCACCCC GGGCGTGACG GGGCTTCTGG GCGCGAACGG GGCGGGCAAG
ACCACGCTCA TGCGCATGGT CTGCGACGTG CTGCGGCCCA CGGGCGGGCA GATTCTGCTC
GACGGGCGCG ACGCGCTGGA GCTCGGCGAC GAGTACCGCG CGCTGCTCGG CTACCTGCCG
CAGGACTTCG GCTACTACCC GGACTTCTCG GCGCTCGACT TTCTGCGTTA CATGGCCACG
CTCAAGGGCT TCGGCGGCCG CGACGGGCGG GTGCGCAGCC TGCAGCTTTT AGAGGAGGTG
GGCCTGGCCG ACGACGCGCG GCGCAAGGTG AAGACCTTCT CGGGCGGCAT GAAGCAGCGC
CTCGGCATCG CGCAGGCCAT GCTCAACGAC CCAGCCATCC TGGTGCTCGA CGAGCCCACG
GCGGGCCTCG ACCCCAAGGA GCGCGTGCGC TTCCGCAACC TCATCGCCGG GTTCGCGCAG
GACAAGATCG TCATCCTCTC CACCCACATC GTGAGCGACG TGGAGTTCAT CGCCAACCGC
ATCCTCGTGA TGAACAAAGG CGCGTTTGCA ATGGACGGCT CTCCTGAACA GGTGGTGGCC
CAAGCCGAAG GCAAGGTGTG GGAATGCCAC GTGGACGCCC GCCGTGCCGA GGCTATGGCG
GAAGCCATGA CCGTTGCCAA CGTGCGTTAT GCCACGGACG GCCATGCAGT CGTGCGCGTG
GTATCTGACG CATGCCCGAT GGAAGGCGCC GTGGTTGTCG AGCCAAGCCT GGAAGACCTG
TACCTGCTCG TGTTCAGCGA CGGTGTCGAA CGATAG
 
Protein sequence
MELKLDRLTK QFGARIAVDR VSATLTPGVT GLLGANGAGK TTLMRMVCDV LRPTGGQILL 
DGRDALELGD EYRALLGYLP QDFGYYPDFS ALDFLRYMAT LKGFGGRDGR VRSLQLLEEV
GLADDARRKV KTFSGGMKQR LGIAQAMLND PAILVLDEPT AGLDPKERVR FRNLIAGFAQ
DKIVILSTHI VSDVEFIANR ILVMNKGAFA MDGSPEQVVA QAEGKVWECH VDARRAEAMA
EAMTVANVRY ATDGHAVVRV VSDACPMEGA VVVEPSLEDL YLLVFSDGVE R