Gene Shel_18420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18420 
Symbol 
ID8395732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2069292 
End bp2069741 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content59% 
IMG OID644986595 
Productpredicted transcriptional regulator 
Protein accessionYP_003144209 
Protein GI257064537 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAA AAGATATCCT TCCCCAATTG CGCTCGGATC GCGGCCTTAC GCAGCAGGAA 
CTTGCGAACA AACTATACGT CACCCGCCAG GCGGTGAGCC GATGGGAGAC GGGCGAAACG
ACGCCGAACG TGGACATGAT CAAGCTGCTC GCCGTCACGC TCGGGGTTCC TGTGGGAGTG
CTTCTGGAAA TGCCCGAGCA CTTCTGCCAG AGCTGCGGCA TGCCCATAGC GGACCCCGCC
ATCCAAGGTA CCGAGGCCGA CGGAAGCCCC TCTGGCGACT ACTGCAAGTG GTGCTATCAG
GACGGTTCCT ACACTTACGA GACCGATTTG GACAACATGA TCGAAAGCTG CGCTCCGTAT
ATGGCCGAGC ACACCGGCAT GAGCCACGAC CAGGCCGTTT CGCTCATGGG GGCAATGCTG
CCCAACCTCA AACGGTGGAA GAAGGACTAA
 
Protein sequence
MAIKDILPQL RSDRGLTQQE LANKLYVTRQ AVSRWETGET TPNVDMIKLL AVTLGVPVGV 
LLEMPEHFCQ SCGMPIADPA IQGTEADGSP SGDYCKWCYQ DGSYTYETDL DNMIESCAPY
MAEHTGMSHD QAVSLMGAML PNLKRWKKD