| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17860 |
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| Symbol | |
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| ID | 8395676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2017125 |
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| End bp | 2018462 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986540 |
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| Product | UDP-N-acetylmuramyl tripeptide synthase |
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| Protein accession | YP_003144154 |
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| Protein GI | 257064482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.934196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCCACG CCGCGTACAA CGCCATGCGT GCTTTGGGCC GAAACGGCCG TGCGCTTCCC
GGCATGATTG CCATGAAGAT TGACGGCAAC ATCATCCATA AGCTGAGCGA TGGCCACAAG
ACCATCATGA TCAGCGGCAC CAACGGCAAG ACCACCACCA CCCACATGGT GCAGCAGGCC
ATCATCAACA CGTTCGGCGG GGCGGCCTAC GACCCCTCCA GCACCAACCT GGAGCAGGGC
ATTGCCACCA CGCTGTGCCT GGACAGCACT ATCGGCGGCA AGCGCAAGAG CGACTGGGCC
GTCATCGAAA GCGACGAGGG GGCCTCGAAG ATCCTCATGC CTGCAACGTT TCCGCAGGTC
CTGGTCGTGA CCAATCTGTA CCGCGACCAG GTGGACCGTT ATCCCACCTG GACTACGGCC
CGCGACTACA TCATCGAGGC CATCAAGAAG TCGCCCGACA CCGTGCTGGT GCTCGACGCT
GACTGCCAGG TGACGGCATC GATCGCCGAT TTCGTGCCCA ACAAGGTGGT GTGGTACGGC
ATGGAGTGCG ACGCCTACGA CGACGGCGTG GCCGACTTTG ACGAGCAGGT GGACTGCATC
AAGTGCGGCG AGCCTCTGTC CTTCGAGCAC CGCACTTTCG CTCATCTGGG AACGTTCACG
TGTCCGAGCT GCGGATATAC GCACCATAAG GCCGACATCG CCGTGGTGGG CATAACCGAC
AAGCAGGAGA AGAGCTGCAC GCTCACGCTG CGGGTCCACG ACCATGAGCT TACCCTGCCG
GTGAACGTGC GCGCCGGCTA CGACGTCTAC AACGCGGTGG CCGCCTTTGC GGGCCTTACC
ACGCTGGGTC TGACCGAACA GCAGGCGGCC GATGCGCTGG CGCACTTCAA GCACGCCGCG
CACCGCTTCG AGATCTTCAA CGTGGAAGGC ACCGAGGCGC GTCTGTTGCT CATGAAGAAC
ACCGCGGGCT GCAACCAGCT CATCAACATG CTGGTGTCCG AGGACAATCC GCCGAAGAAC
CTGGTGTGCC TGCTGGGCAA CGAAATCATG GACGGCATCT ACACCGACTG GATCAAGGGC
GTGCATTGGG AGAAGCTCAT CACGCCGGAG ACGAAGGTCA TCGTGGGCGG CCCGTGCTTC
GAGGACATGA AGGCGCGTCT GGTCGAAGCG GGCGTCGACG AGTCCAGGAT GCGAATCCAG
ACCGACTACG CCGGGCTTGT GGCCGATATC GCAGCCATGG ACGAGCCGGT GACGGTCATC
GCCAACTGCT CGACCATCGA GGCGCTCCGC GTGGAGCTGG TCAAGAGCTA CCAACCCATG
GATTACTGGG AAGAATAG
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| Protein sequence | MCHAAYNAMR ALGRNGRALP GMIAMKIDGN IIHKLSDGHK TIMISGTNGK TTTTHMVQQA
IINTFGGAAY DPSSTNLEQG IATTLCLDST IGGKRKSDWA VIESDEGASK ILMPATFPQV
LVVTNLYRDQ VDRYPTWTTA RDYIIEAIKK SPDTVLVLDA DCQVTASIAD FVPNKVVWYG
MECDAYDDGV ADFDEQVDCI KCGEPLSFEH RTFAHLGTFT CPSCGYTHHK ADIAVVGITD
KQEKSCTLTL RVHDHELTLP VNVRAGYDVY NAVAAFAGLT TLGLTEQQAA DALAHFKHAA
HRFEIFNVEG TEARLLLMKN TAGCNQLINM LVSEDNPPKN LVCLLGNEIM DGIYTDWIKG
VHWEKLITPE TKVIVGGPCF EDMKARLVEA GVDESRMRIQ TDYAGLVADI AAMDEPVTVI
ANCSTIEALR VELVKSYQPM DYWEE
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