Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17790 |
Symbol | |
ID | 8395669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2010610 |
End bp | 2011464 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986533 |
Product | 4Fe-4S protein |
Protein accession | YP_003144147 |
Protein GI | 257064475 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATCC AGGACGACAT CCGAATCCGT GCGGCAGAGC TGCTTGCATC GGGCGACATC GCCGTGTTCG TGGGCTGGGA GGCCGGACGC CTGGAGAACC AGACCACGCC TTTCGTCATG TCCGACCCCG CCCAGGCAGA TCGCCTGGTC TACAACGATT ATTGCGTGAA CACCCTGGCC AAATACGCCC GTGACCTGGT AGGTCGTGGC AAGGTTGGCA TGGTGGTCCG CGGATGCGAC AGCCGCGGCA TTGTGCGCCT GATCAACGAC ATGGTCATTT CACGCGATGA CGTCTACCTG CTGGGCGTGG GATGCGCCGG CGTGCTGGAC CGCAAGACCG GTGAGATGCT CAAGAAATGC ACCGAATGCC GCCACAACAA CCCGGTGCTC TGCGACGAGA TGATCGGCGA GCCCGTGGGG AAACCCGTAC CTGAGAACCG TTTCTCCGAG GTCGCCTCGA TCGAAGCCAT GACGCAGCCC GAGCGCTCGA ATTACTTCGA GAACATGTAC GCCAGCTGCA TCCGCTGCTA TGCCTGCCGC GACGTGTGCC CCTGCTGCAC CTGCCGCGAG TGCTTCGTCG ACCAGCGCCG CGAAGGCTGG GTGGGCAAGC AGAACAACGT AGCCGAGAAC CGCTTCTACA GTCTGACCCG CGTGATGCAC ATCGGCGACC GTTGCATCGA ATGCGGCGAA TGCGAACGGG CCTGCCCCAT GGGGCTTCCC CTCATGAAGC TCAACCGCAA GGTGATTCAG GACATGAACG CGCTGTTCGG CGAGTTCGAA TCGTCCATGG GACTCAACGA TCCGCCCGAG GTGCTCACCA CCTATGACGT CAACGACCGA GAAGAATTCA TGTAA
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Protein sequence | MTIQDDIRIR AAELLASGDI AVFVGWEAGR LENQTTPFVM SDPAQADRLV YNDYCVNTLA KYARDLVGRG KVGMVVRGCD SRGIVRLIND MVISRDDVYL LGVGCAGVLD RKTGEMLKKC TECRHNNPVL CDEMIGEPVG KPVPENRFSE VASIEAMTQP ERSNYFENMY ASCIRCYACR DVCPCCTCRE CFVDQRREGW VGKQNNVAEN RFYSLTRVMH IGDRCIECGE CERACPMGLP LMKLNRKVIQ DMNALFGEFE SSMGLNDPPE VLTTYDVNDR EEFM
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