Gene Shel_17770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17770 
Symbol 
ID8395667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2008113 
End bp2010095 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content63% 
IMG OID644986531 
Productpolyferredoxin, heterodixulfide reductase subunit A 
Protein accessionYP_003144145 
Protein GI257064473 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGAA TCGGAGTGTT CATCTGCCAC TGCGGCACCA ACATCGCAGC GACGGTGGAC 
GTGGAAGCCG TAGCCGCCGC CGCCCGCAAG CTGCCCGAAG TGGTGCATGT CGAAACCAAT
AAGTACACGT GCTCCGACCC GGGCCAGGAA GGCCTGCGCC AGGCCATCGT CGACCATGGG
ATCGACCGCG TGGTCGTCGC CGCCTGTTCG CCCCGCATGC ATGAGGCGAC CTGGCGAAAG
CTTCTGGCCG ACACGCCCGT GAACCCCTAC ATGCTGGAAG TAGCGAACAT CCGTGAGCAG
TGCTCCTGGG TGCACAAGGA CCGCAGCGTG GCCACGGAAA AGGCCATCGA CCTGGTGAAG
ATGGCCGTGG CCAAGGTGGC CCGCCTGCAG CCCCTGCATT CCACGGAAAT CCCCGTGCAC
AAGCGCGCCT TGGTCATCGG CGGCGGCATC GCCGGCATGC AGACGGCCTT GGACATCGCC
GACGCCGGAT TCCCTGTGAC CATTGTCGAA CGGGAAACGT CGTTGGGCGG CAAGATGGTC
ATGCTGGACA AGACCTTCCC CACCATGGAC TGCTCGGCCT GCATCTGCAC ACCGAAGATG
TCGGAAGTGG GCAACCACCC CAACATCACG GTGAAGACCC TGGCCGAGGT GGAGAACGTC
TCCGGCTACA TCGGCAACTT CGAAGTGACC ATCCGCGAGA AAGCCAAGTA CATCGATTAC
AACCTGTGCA CCGGTTGCGG CGCCTGCGAG ACCAAATGCC CCGTGCGCGT GGACAGCGAT
TTCGAGCAAG GCATGAAGAA ACGCACGGCC ATCTACAAGA TGTTCCCCCA GGCCGTGCCC
GCCAAGCCGG TCATCGACGC CGCGCATTGC CGCAAGCTCA CCGAAGGCAA GTGCGGCGTG
TGCGCTCGGG TGTGCCCCAC CGGCGCCATC CGCTATGACG ACGAGGACAA GGTGACCACC
GAAACCTACG GCGCGATCAT CTTCGCCACC GGATACCAGC TCATCGACTG GAAGCCTCTG
TATCCCGAAT ACGGCGGAGG CAAATACCCC GACGTCATCA CAGGCCTGCA GTTCGAACGC
CTGGTCAACG CCTCCGGCCC CACCGAAGGC CACATCCTGC GCCCCTCCGA CGGCACCGAG
CCCAAGACGG TGGTCATCGT CAAGTGCGTC GGTAGCCGCG ACCCTACCAA GGGTAAAGCC
TACTGTTCCC GTGCCTGCTG CATGTATTCG GCCAAGCACG CCCACCAGTA TCTTGAAAAG
GTGTCCGACG GCCGCTGCTA CGTCTTCTAC ATGGATGTAC GCACGCCGGG CAAAGGCTAC
GACGAGTTCT ATGTGAACAC GGTGCATGAA GGTGCCCAGT ATCTGCGCGG CCGCGTATCG
AAGATCTTTA AGGAAGGCGA CAAGCTCATC TGCAAGGGCG AGGACACCCT CACAAGCCGG
CAGGTCAGCG TCGCTGCGGA TATGGTAGTG CTCGAAACCG CGATGGTGCC CGCCGACGGC
ATCGACGAGC TTGCTGCGAA ATGCACCGTG GGCCGCGACG CCGACAGCTG GCTGGTGGAA
GCCCATGCCA AGCTGCGTCC CGTCGAGACG AACACAGCCG GCATCTATCT GGCAGGCACC
TGCCAGGGCC CTAAAGACAT CCCCGACACG GTCTGCCAGG CAGGCGCTGC CGCATCGAAG
GTCATCGGTC TGCTCAACAA AGACATGCTG CAGTCCAACC CGCAGATCTC ACGCGTGAAC
GAGAGCCTGT GCCAAGGCGA TGGTGCCTGC GTGAACACCT GCCCCTACGG CGCCATCTCC
ATCGTGCAGA AGCAGTTCCG CGAGAACTCG AAGAAGGTCA CGCGCCCGGT GGCACAGGTG
AACCCCGGCC TCTGCCAGGG CTGCGGCGCC TGCACCGTCA CCTGTCGCGC CGGAGCTATG
GATCTGCTCG GCTACACCAA CGAGTCCATC ATGAGGGAGG TTGATGCGCT GTGTCAGTGG
TAG
 
Protein sequence
MSRIGVFICH CGTNIAATVD VEAVAAAARK LPEVVHVETN KYTCSDPGQE GLRQAIVDHG 
IDRVVVAACS PRMHEATWRK LLADTPVNPY MLEVANIREQ CSWVHKDRSV ATEKAIDLVK
MAVAKVARLQ PLHSTEIPVH KRALVIGGGI AGMQTALDIA DAGFPVTIVE RETSLGGKMV
MLDKTFPTMD CSACICTPKM SEVGNHPNIT VKTLAEVENV SGYIGNFEVT IREKAKYIDY
NLCTGCGACE TKCPVRVDSD FEQGMKKRTA IYKMFPQAVP AKPVIDAAHC RKLTEGKCGV
CARVCPTGAI RYDDEDKVTT ETYGAIIFAT GYQLIDWKPL YPEYGGGKYP DVITGLQFER
LVNASGPTEG HILRPSDGTE PKTVVIVKCV GSRDPTKGKA YCSRACCMYS AKHAHQYLEK
VSDGRCYVFY MDVRTPGKGY DEFYVNTVHE GAQYLRGRVS KIFKEGDKLI CKGEDTLTSR
QVSVAADMVV LETAMVPADG IDELAAKCTV GRDADSWLVE AHAKLRPVET NTAGIYLAGT
CQGPKDIPDT VCQAGAAASK VIGLLNKDML QSNPQISRVN ESLCQGDGAC VNTCPYGAIS
IVQKQFRENS KKVTRPVAQV NPGLCQGCGA CTVTCRAGAM DLLGYTNESI MREVDALCQW