Gene Shel_17670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17670 
Symbol 
ID8395657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1994102 
End bp1995613 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content62% 
IMG OID644986521 
Producttype I restriction-modification system methyltransferase subunit 
Protein accessionYP_003144135 
Protein GI257064463 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGCA AGAAGGCAGA CAACACCGCG GAGATCGGCT TCGAGCAGCA GATATGGTCT 
GCCGCCGACA AGCTGCGCGG CAACATGGAC GCGTCCGAGT ACAAGAACGT CGTGCTGGGG
CTGATCTTCC TCAAGTACAT CTCAGACAAG TTCGAGCAGC GCTACCAGGA GCTGGTCGAC
GAGGGCGAGG GCTTCGAGGA GGACCGCGAC GAGTACACCT ACAAGAACAT CTTCTTCGTG
CCCCCAGAGG CCAGGTGGGG CGTGATCGCC GGCGCCGCCC ACACGCCCGA GATCGGCAAG
GCAATCGACA ACGCCATGCG CCTCATCGAG GCGGAGAACG ACAAGCTCAA GAACATCCTG
CCCAAGAACT TCGCGCGACA GGAGCTTGAC AAGCGCAGGC TCGGCGAGGT CGTGGACCTG
TTCACCAACG TGCAGATGGC CGAGAAGGGC GACACCCGCG ACATCCTGGG CCGCACCTAC
GAGTACTGCC TCTCCAAGTT CGCCGAGGCC GAGGGCAAGA ACGCGGGAGA GTTCTACACG
CCCGCCTGCG TCGTGCGCAC GCTGGTCGAG ATCATCGAGC CGTACCGCGG CCGCGTATAC
GACCCGTGCT GCGGGTCCGG CGGCATGTTC GTGCAGTCGG CCCAGTTCGT GAAGAACCAC
CAGGGCAGGA TCGACGACCT GTCCGTGTAC GGCCAGGAAT CCAACCCGAC CACATGGAAG
ATGGCGATGA TGAACCTCGC CATCCGGGGC ATCGACGCGG ACCTGGGCAC CTTCAACGCC
GACACTTTCT TCAACGACAT CCACAAGAAC GAGCGCTTCG ACTTCGTGCT GGCGAACCCG
CCGTTCAACA TGAGCGACTG GGGCGGCGAG CAGCTGAAGG AGGACCCGCG CTGGGACTTC
GGCACGCCTC CTGCAGGCAA CGCCAACTTC GCCTGGATGC AGCATATGAT CCACCACCTG
GCCGACGACG GGCGCATGGG CATGGTGCTC GCGAACGGCT CGCTTTCTTC GCAAACGAAC
AACGAGGGTG CTATCAGGCA GAAGATCGTG GATGCAGGCC TGGTTGAAGG CATCGTGGCC
ATGCCGGACC GCCTCTTCTA CAGTACGGGC ATCCCCGTGA GCCTGTGGAT CATCAGCAAG
GAATCGAACC GACAGCGCAG GACACTCTTC GTGGACGCCC GCGAGATGGG CACGATGGTG
AGTCGCCGTC TGCGCGAGTT CACAGACGAG GACATAGCAA AGGTCGCCGA AACTTTCGAT
GCCTTCCGCA AAGGTGAGCT TGAGGACGAG AAGGGCTTCT GCGCCGCCGT CGACATCGAG
GACATCGCCA AGCAGGACTA CATCCTCACA CCCGGCCGCT ACGTTGGCAT AAAGGACGAA
GAAGACGACG GCGAGCCCTT CGAGGAGAAG ATGGAGCGCC TGACCGGTGA GCTTGCCAAG
TGTTTTGATG AGTCTAACCG GCTGCAGCAG CAGATTCGCA AGAACTTGGA GGCTATCGGC
TATGGGTTCT AA
 
Protein sequence
MARKKADNTA EIGFEQQIWS AADKLRGNMD ASEYKNVVLG LIFLKYISDK FEQRYQELVD 
EGEGFEEDRD EYTYKNIFFV PPEARWGVIA GAAHTPEIGK AIDNAMRLIE AENDKLKNIL
PKNFARQELD KRRLGEVVDL FTNVQMAEKG DTRDILGRTY EYCLSKFAEA EGKNAGEFYT
PACVVRTLVE IIEPYRGRVY DPCCGSGGMF VQSAQFVKNH QGRIDDLSVY GQESNPTTWK
MAMMNLAIRG IDADLGTFNA DTFFNDIHKN ERFDFVLANP PFNMSDWGGE QLKEDPRWDF
GTPPAGNANF AWMQHMIHHL ADDGRMGMVL ANGSLSSQTN NEGAIRQKIV DAGLVEGIVA
MPDRLFYSTG IPVSLWIISK ESNRQRRTLF VDAREMGTMV SRRLREFTDE DIAKVAETFD
AFRKGELEDE KGFCAAVDIE DIAKQDYILT PGRYVGIKDE EDDGEPFEEK MERLTGELAK
CFDESNRLQQ QIRKNLEAIG YGF