Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17490 |
Symbol | |
ID | 8395639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1977687 |
End bp | 1979009 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986503 |
Product | cytosine deaminase-like metal-dependent hydrolase |
Protein accession | YP_003144117 |
Protein GI | 257064445 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0541623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC TGATCAAGAA CGGTCTCGTT CTGCTGCACG GAGAGTCCGG ATGGACCTGT GAAAAACGCG ATGTCCTCAT CGCCGGTAAC CGCATCGAAC GCATCGCGCC CGATGTTGAG CCGCAGGATT GCACGGTCAT CGATGCGACG GGAATGCTTG CCATGCCCGG GCTTATCAAC GCGCATACCC ACGCCTACAT GACGTTCCAT CGCAACTACG CGGACGACAT GGCCTTTTTC GACTGGCTGG ACAAGGTGCA GGTGCTTGAG GACTACATGA CCGAGGAAGA CGTCTACTGG GCGACGTTGC TGGCCGCCTG CGAGATGATT CGCAGCGGCA CCACCTGCTT CGTGGATATG ACGATCAAGT CGGCCCAGGA GACAGACGGT CCGCGCTCCG CGGCGGCAGG CGCCGTGCGC GACAGCGGCA TGCGCGCGGT CATTTCCCGC GGCCTTGCGG GCGTGGCCGA CTCCGAGGAG TCCATCATGA AATTCGGCCA GGCCGTGCGG GAAATGGAGC TGTTCAAGGA CGAAAGCCGG CTCCAATTCA TCCACGGCCC CCATGCTCCG TACAGCTGCA TGGCCGACTA CCTGCAGAAG CTTACGCAAT CGTGCAAGGA GCGTGGCATC GGCCAGACCA TACACCTGTC CGAGAGCCGC ACCGAGATGG CAGGCGTTGC GGAAGATCAC GGCACCACGC CGATCCAGTA CGTCGACGGA CTCGGTGTCT TCGACGTGCC GGTAATCGCC GCGCATTGCG TGTACGCGAC CGACGAGGAC ATCCGCCTTA TGGCGGAAAA GGGCGTGAGC GTTGCGCTGA ACCCCAAGAG CAACATGAAA CTGGGCAACG GGTTCGCGCC TGCCCAGAAG TTCCTGGATG CCGGCATCAA CGTGTGCCTG GGTACGGACG GCTGCGGCAG CAACAACAGC TTGAACCTGT TTTCCGAGAT GAACGTCGCG TCGCTTGTGT ACAAAGGTGC CACCGAGCAG GCGCAATGCG TGAGCGCCGC CGACGTGCTG CGCATGGCGA CGTTGAACGG CGCAAAGGCG ATCGGACGTG AAGGCGAGCT GGGCGTACTT GCAGAAGGCG CCTTGGCGGA CGTGATTCTG GTCAATCTGA ACGAACCCCA GTTCATGCCG GCGAACAACA TCGTTTCGGG TCTTGTGTAT TCCGCCAAAG GCAGCGAGGT GGATACGGTC ATCGTCGACG GTGAGCTGCT TATGGAGCAC CGAAGGCTCG TGAGCATCGA CGAGGCGAAG GTGTTCGAAG AGTGCCGCGC AATCATGGAG CGGTTGGACG CGCAAGTGCA AGAGCGCCTG TAA
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Protein sequence | MNTLIKNGLV LLHGESGWTC EKRDVLIAGN RIERIAPDVE PQDCTVIDAT GMLAMPGLIN AHTHAYMTFH RNYADDMAFF DWLDKVQVLE DYMTEEDVYW ATLLAACEMI RSGTTCFVDM TIKSAQETDG PRSAAAGAVR DSGMRAVISR GLAGVADSEE SIMKFGQAVR EMELFKDESR LQFIHGPHAP YSCMADYLQK LTQSCKERGI GQTIHLSESR TEMAGVAEDH GTTPIQYVDG LGVFDVPVIA AHCVYATDED IRLMAEKGVS VALNPKSNMK LGNGFAPAQK FLDAGINVCL GTDGCGSNNS LNLFSEMNVA SLVYKGATEQ AQCVSAADVL RMATLNGAKA IGREGELGVL AEGALADVIL VNLNEPQFMP ANNIVSGLVY SAKGSEVDTV IVDGELLMEH RRLVSIDEAK VFEECRAIME RLDAQVQERL
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