Gene Shel_17170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17170 
Symbol 
ID8395607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1939849 
End bp1940985 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID644986471 
Productuncharacterized Fe-S center protein 
Protein accessionYP_003144085 
Protein GI257064413 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.402472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAG CATCGGCGCT GGTCGCGTCG GCTGCGCTAT GGGGCTGTAC CGACCGTTCG 
GGCTCTGCAG CAGGTGCTGA ATCCATCGAC GGAGAAAATC AGGAGGCTCC CATGACCAAC
GCACAGCCTA CGCCTGGAAC CGGCGGAAAC ATCTACGTGC CCTTCGACAA GCGTACGGGC
GAATCGTCCG TGGTGTTCTT CACTCGTGAC CTGACCGCTG CGGGCCTGAT GAAGGCCTAT
GACGCCGTGG CTTCGGTGCT GGAAGGCAAG GTTGCCGTCA AGCTGCACAC AGGCGAGGAG
CACGGCCCCA ACATCATCCC GCGCCCGTGG GTGAAAAACC TCATGGAGCA GAGGTTGCCC
AACGGCACCA TCGTCGAGAC CAACACGTAT TACGAAGGCG ACCGCGACAC CACCGAAAAG
CATCGCGCCA CCATTGAAGC CAACGGTTGG ACCTTTGCGG ACGTCGACAT CATGGACGAG
TTCGGCACGG CCGAGCTGCC TGTGGCGGGC GGCAAGTGGT TTACCGAAAT GACCGTGGGC
GAACACCTGC TGAACTATGA TTCGTTCCTG GCGCTAACGC ATTTCAAGGG ACACACCATG
GGCGGTTTCG GCGGGTCCAA CAAGAACATC GGCATCGGCT GCGCCGACGC ACACATTGGC
AAGAAGGCCA TTCACACCGC CGAAGGCTCC AGCGACATGT GGTCCATCGC CGAAGAGGAG
CTGATGGAGC GCATATCCGA GTCCACCAAG GCCACGGCCG ACTACTTCGC GGGCAAGATC
GCCTATGTGA ACGTGATGCG CAACATGTCT GTGAGCTGCG ACTGCGAGGG CCGCGCTGCC
CAGCCGGTGG TTACGCCGGA CGTGGGCATT TTGGCGTCGC TGGACATCCT GGCCCTTGAC
CAGGCCTGCG TCGATCTGGT GTATGCGCTG CCGGAGGAAA GCCACAAGGC TTTGGTGGAG
CGCATCGAGA CCCGCCACGG CCTGCGCCAG CTGAGCTACA TGAAAGAGCT CGGCATGGGT
AACGACCGCT ACACCTTGAT CGATCTGGAC AACGGCGGGT GCGAGATCAC CCAGGCCGAA
GCTGTGGCCC ATGCTAAGCC CACGTGGGAA GACGACGGGC AGGGCGCCTA CGAGTAG
 
Protein sequence
MSGASALVAS AALWGCTDRS GSAAGAESID GENQEAPMTN AQPTPGTGGN IYVPFDKRTG 
ESSVVFFTRD LTAAGLMKAY DAVASVLEGK VAVKLHTGEE HGPNIIPRPW VKNLMEQRLP
NGTIVETNTY YEGDRDTTEK HRATIEANGW TFADVDIMDE FGTAELPVAG GKWFTEMTVG
EHLLNYDSFL ALTHFKGHTM GGFGGSNKNI GIGCADAHIG KKAIHTAEGS SDMWSIAEEE
LMERISESTK ATADYFAGKI AYVNVMRNMS VSCDCEGRAA QPVVTPDVGI LASLDILALD
QACVDLVYAL PEESHKALVE RIETRHGLRQ LSYMKELGMG NDRYTLIDLD NGGCEITQAE
AVAHAKPTWE DDGQGAYE